Package: smdi 0.3.1

Janick Weberpals

smdi: Perform Structural Missing Data Investigations

An easy to use implementation of routine structural missing data diagnostics with functions to visualize the proportions of missing observations, investigate missing data patterns and conduct various empirical missing data diagnostic tests. Reference: Weberpals J, Raman SR, Shaw PA, Lee H, Hammill BG, Toh S, Connolly JG, Dandreo KJ, Tian F, Liu W, Li J, Hernández-Muñoz JJ, Glynn RJ, Desai RJ. smdi: an R package to perform structural missing data investigations on partially observed confounders in real-world evidence studies. JAMIA Open. 2024 Jan 31;7(1):ooae008. <doi:10.1093/jamiaopen/ooae008>.

Authors:Janick Weberpals [aut, cre, cph]

smdi_0.3.1.tar.gz
smdi_0.3.1.tar.gz(r-4.5-noble)smdi_0.3.1.tar.gz(r-4.4-noble)
smdi_0.3.1.tgz(r-4.4-emscripten)smdi_0.3.1.tgz(r-4.3-emscripten)
smdi.pdf |smdi.html
smdi/json (API)
NEWS

# Install 'smdi' in R:
install.packages('smdi', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.53 score 34 scripts 211 downloads 13 exports 152 dependencies

Last updated 3 months agofrom:d874ec5506. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 04 2024
R-4.5-linuxOKDec 04 2024

Exports:gg_miss_upsetmd.patternsmdi_asmdsmdi_check_covarsmdi_diagnosesmdi_hotellingsmdi_littlesmdi_na_indicatorsmdi_outcomesmdi_rfsmdi_style_gtsmdi_summarizesmdi_vis

Dependencies:backportsbase64encbigDbitbit64bitopsbootbroombslibcachemcaretclassclicliprclockcodetoolscolorspacecommonmarkcorpcorcpp11crayoncurldata.tableDBIdiagramdigestdplyre1071evaluatefansifarverfastDummiesfastmapfontawesomeforcatsforeachfsfuturefuture.applygdatagenericsggplot2glmnetglobalsgluegmodelsgowergridExtragtgtablegtoolshardhathavenhighrhmsHotellinghtmltoolshtmlwidgetsipredisobanditeratorsjomojquerylibjsonlitejuicyjuiceKernSmoothknitrlabelinglabelledlatticelavalifecyclelistenvlme4lubridatemagrittrmarkdownMASSMatrixmemoisemgcvmicemimeminqamitmlmitoolsModelMetricsmunsellnaniarnlmenloptrnnetnormnumDerivordinalpanparallellypillarpkgconfigplyrprettyunitspROCprodlimprogressprogressrproxypurrrR6randomForestrappdirsRColorBrewerRcppRcppArmadilloRcppEigenreactablereactRreadrrecipesreshape2rlangrmarkdownrpartsassscalesshapeSQUAREMstringistringrsurveysurvivaltableonetibbletidyrtidyselecttimechangetimeDatetinytextzdbucminfUpSetRutf8V8vctrsviridisviridisLitevisdatvroomwithrxfunxml2yamlzoo

Data generation

Rendered froma_data_generation.Rmdusingknitr::rmarkdownon Dec 04 2024.

Last update: 2024-10-05
Started: 2023-07-17

Get started with smdi

Rendered fromsmdi.Rmdusingknitr::rmarkdownon Dec 04 2024.

Last update: 2023-07-17
Started: 2023-07-17

Multivariate missingness and monotonicity

Rendered fromc_multivariate_missingness.Rmdusingknitr::rmarkdownon Dec 04 2024.

Last update: 2024-07-26
Started: 2023-07-17

NARFCS sensitivity analysis

Rendered fromd_narfcs_sensitivity_analysis.Rmdusingknitr::rmarkdownon Dec 04 2024.

Last update: 2024-07-26
Started: 2023-07-17

Routine structural missing data diagnostics

Rendered fromb_routine_diagnostics.Rmdusingknitr::rmarkdownon Dec 04 2024.

Last update: 2024-07-26
Started: 2023-07-17