Introduction | A first example | Data | Spatial Influence Function approach : siland() | Visual check of likelihood maximisation procedure. | siland() arguments | Mixed model | Non gaussian model | Model with interaction between local and landscape variables | Multiyear model and multisite model | Remarks
Package: siland 3.0.2
Martin Olivier
siland: Spatial Influence of Landscape
Method to estimate the spatial influence scales of landscape variables on a response variable. The method is based on Chandler and Hepinstall-Cymerman (2016) Estimating the spatial scales of landscape effects on abundance, Landscape ecology, 31: 1383-1394, <doi:10.1007/s10980-016-0380-z>.
Authors:
siland_3.0.2.tar.gz
siland_3.0.2.tar.gz(r-4.7-any)siland_3.0.2.tar.gz(r-4.6-any)
siland_3.0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
siland/json (API)
| # Install 'siland' in R: |
| install.packages('siland', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- dataSiland - Simulated data
- landSiland - Simulated landscape.
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:24e1de515f. Checks:2 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 261 | ||
| source / vignettes | OK | 263 | ||
| linux-release-x86_64 | NOTE | 275 | ||
| wasm-release | OK | 136 |
Exports:AIC.silandBIC.silandbufferforsilandfitted.silandlandtorasterplot.silandplotsilandplotsiland.landplotsiland.sifprint.silandresiduals.silandsilandsiland.liksiland.quantilesummary.siland
Dependencies:base64encbootclassclassIntclicpp11DBIdotCall64e1071farverfasterizefieldsggforceggplot2gluegtableisobandjsonliteKernSmoothlabelinglatticelifecyclelme4magrittrmapsMASSMatrixminqanlmenloptrplyrpolyclipproxyR6rasterrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasreshape2rlangs2S7scalessfspspamstringistringrsystemfontsterratidyselecttweenrunitsvctrsviridisLitewithrwk
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Spatial Influence of Landscape | siland-package |
| Akaike's An Information Criterion for siland package | AIC.siland |
| Bayesian Information criterion | BIC.siland |
| Percentage of landscape variable in buffers. | bufferforsiland |
| Simulated data | dataSiland |
| Extract siland model Fitted values | fitted.siland |
| Simulated landscape. | landSiland |
| Transformation of an sf object into raster | landtoraster |
| Plot an object of class siland | plot.siland |
| Plot results from siland function | plotsiland |
| Map of siland result | plotsiland.land |
| Plot the estimated spatial influence functions. | plotsiland.sif |
| siland print | print.siland |
| Extract siland Residuals | residuals.siland |
| Estimation of landscape influence using siland method (Spatial Influence Function) | siland |
| -(Loglikelihood) as a function of SIF parameters. | siland.lik |
| Quantile of spatial influence function (SIF) | siland.quantile |
| The function gives a summary of an object of class siland | summary.siland |