Package: shinyCox 1.1.2
Harrison Clement
shinyCox: Create 'shiny' Applications for Cox Proportional Hazards Models
Takes one or more fitted Cox proportional hazards models and writes a 'shiny' application to a directory specified by the user. The 'shiny' application displays predicted survival curves based on user input, and contains none of the original data used to create the Cox model or models. The goal is towards visualization and presentation of predicted survival curves.
Authors:
shinyCox_1.1.2.tar.gz
shinyCox_1.1.2.tar.gz(r-4.5-noble)shinyCox_1.1.2.tar.gz(r-4.4-noble)
shinyCox_1.1.2.tgz(r-4.4-emscripten)shinyCox_1.1.2.tgz(r-4.3-emscripten)
shinyCox.pdf |shinyCox.html✨
shinyCox/json (API)
NEWS
| # Install 'shinyCox' in R: |
| install.packages('shinyCox', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/harryc598/shinycox/issues
Last updated 22 days agofrom:94b3bb677b. Checks:OK: 2. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 09 2024 |
| R-4.5-linux | OK | Dec 09 2024 |
Exports:cox_KM_plotscox_times_tableget_confintmake_coxphpredict_one_coxfitpredict_seprep_coxfitshine_coxphsurv_pred_info
Dependencies:base64encbslibcachemclicommonmarkcrayondigestfastmapfontawesomefsgluehtmltoolshttpuvjquerylibjsonlitelaterlatticelifecyclemagrittrMatrixmemoisemimepromisesR6rappdirsRcpprlangsassshinysourcetoolssurvivalwithrxtable
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Generate Cox-model predicted Kaplan-Meier plots | cox_KM_plots |
| Create table of Cox-model predicted probabilities | cox_times_table |
| Get confidence intervals for predicted survival curves | get_confint |
| Wrapper to create 'survival::coxph()' object suitable for 'shine_coxph()' | make_coxph |
| Compute Cox-model predicted survival function | predict_one_coxfit |
| Creates predicted survival and standard errors for confidence intervals | predict_se |
| Create simplified 'coxph()' object for shiny app | prep_coxfit |
| Generates a shiny app for predictions from Cox model(s) | shine_coxph |
| Obtains information for standard errors of predictions | surv_pred_info |