Package: serocalculator 1.0.3
serocalculator: Estimating Infection Rates from Serological Data
Translates antibody levels measured in cross-sectional population samples into estimates of the frequency with which seroconversions (infections) occur in the sampled populations. Replaces the previous 'seroincidence' package. Methods originally published in Simonsen et al. (2009) <doi:10.1002/sim.3592> and Teunis et al. (2012) <doi:10.1002/sim.5322>, and further developed in subsequent publications by de Graaf et al. (2014) <doi:10.1016/j.epidem.2014.08.002>, Teunis et al. (2016) <doi:10.1016/j.epidem.2016.04.001>, and Teunis et al. (2020) <doi:10.1002/sim.8578>.
Authors:
serocalculator_1.0.3.tar.gz
serocalculator_1.0.3.tar.gz(r-4.5-noble)serocalculator_1.0.3.tar.gz(r-4.4-noble)
serocalculator_1.0.3.tgz(r-4.4-emscripten)serocalculator_1.0.3.tgz(r-4.3-emscripten)
serocalculator.pdf |serocalculator.html✨
serocalculator/json (API)
NEWS
# Install 'serocalculator' in R: |
install.packages('serocalculator', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ucd-serg/serocalculator/issues
Last updated 2 months agofrom:ddad74d1e0. Checks:OK: 2. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 21 2024 |
R-4.5-linux-x86_64 | OK | Aug 21 2024 |
Exports:check_pop_dataclean_pop_dataest.incidenceest.incidence.byf_devfdevgraph.curve.paramsgraph.loglikllikload_curve_paramsload_noise_paramsload_pop_datalog_likelihoodplot_curve_params_one_absim.cssim.cs.multi
Dependencies:abindaskpassbackportsbase64encbootbroombslibcachemcarcarDataclicodetoolscolorspacecorrplotcowplotcpp11crosstalkcurldata.tableDerivdigestdoBydoParalleldplyrevaluatefansifarverfastmapfontawesomeforeachfsgenericsggplot2ggpubrggrepelggsciggsignifgluegridExtragtablehighrhtmltoolshtmlwidgetshttrisobanditeratorsjquerylibjsonlitekernlabknitrlabelinglaterlatticelazyevallifecyclelme4magrittrMASSMatrixMatrixModelsmemoisemgcvmicrobenchmarkmimeminqamixtoolsmodelrmunsellnlmenloptrnnetnumDerivopensslpbkrtestpillarpkgconfigplotlypolynompromisespurrrquantregR6rappdirsRColorBrewerRcppRcppEigenrlangrmarkdownrngtoolsrstatixsassscalessegmentedSparseMstringistringrsurvivalsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyaml