Package: scatterbar 0.1.0

Dee Velazquez

scatterbar: Scattered Stacked Bar Chart Plots

Provides a powerful and flexible tool for visualizing proportional data across spatially resolved contexts. By combining the concepts of scatter plots and stacked bar charts, 'scatterbar' allows users to create scattered bar chart plots, which effectively display the proportions of different categories at each (x, y) location. This visualization is particularly useful for applications where understanding the distribution of categories across spatial coordinates is essential. This package features automatic determination of optimal scaling factors based on data, customizable scaling and padding options for both x and y axes, flexibility to specify custom colors for each category, options to customize the legend title, and integration with 'ggplot2' for robust and high-quality visualizations. For more details, see Velazquez et al. (2024) <doi:10.1101/2024.08.14.606810>.

Authors:Dee Velazquez [aut, cre], Jean Fan [aut, rev]

scatterbar_0.1.0.tar.gz
scatterbar_0.1.0.tar.gz(r-4.5-noble)scatterbar_0.1.0.tar.gz(r-4.4-noble)
scatterbar_0.1.0.tgz(r-4.4-emscripten)scatterbar_0.1.0.tgz(r-4.3-emscripten)
scatterbar.pdf |scatterbar.html
scatterbar/json (API)
NEWS

# Install 'scatterbar' in R:
install.packages('scatterbar', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/jefworks-lab/scatterbar/issues

Datasets:
  • adult_mouse_brain_ffpe - Deconvolved cell-type proportions from STdeconvolve for a Visium data from the adult mouse brain along with the positions of their respective spots
  • mOB - Deconvolved cell-type proportions from STdeconvolve for a Spatial Transcriptomic dataset of the mouse olfactory bulb along with the positions of their respective spots

3.65 score 18 scripts 1 exports 36 dependencies

Last updated 2 days agofrom:d67c642a0a. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 25 2024
R-4.5-linuxOKNov 25 2024

Exports:scatterbar

Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr

Customizing scatterbar

Rendered fromcustomizing_scatterbar.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-25
Started: 2024-11-25

Flipping scatterbar oreintations and positions

Rendered fromflipping-scatterbar-oreintations.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-25
Started: 2024-11-25

Getting started with scatterbars

Rendered fromgetting-started-with-scatterbars.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-25
Started: 2024-11-25

Using scatterbar with Visium data

Rendered fromusing-scatterbar-with-visium.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-25
Started: 2024-11-25

Visualizing multiple datasets with scatterbar

Rendered fromvisualizing-multiple-datasets.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-25
Started: 2024-11-25