Package: rxode2lincmt 0.1.0
Matthew L. Fidler
rxode2lincmt: Linear Compartment Model Solutions and Gradients for 'rxode2'
Analytic one, two and three compartment linear pharmacokinetic solutions with their parameter gradients from 'stan' automatic differentiation (Carpenter et al (2015) <doi:10.48550/arXiv.1509.07164>), eigen decompositions and derived-parameter conversions used by 'rxode2' (Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>). Split out of 'rxode2' so its installation does not compile 'stan' AD items which made it take too long to compile by itself. The closed-form solutions follow the idea of the 'wnl' package (Bae, <https://CRAN.R-project.org/package=wnl>), though the implementation here is different.
Authors:
rxode2lincmt_0.1.0.tar.gz
rxode2lincmt_0.1.0.zip(r-4.7-x86_64)rxode2lincmt_0.1.0.zip(r-4.7-arm64)rxode2lincmt_0.1.0.zip(r-4.6-x86_64)rxode2lincmt_0.1.0.zip(r-4.6-arm64)
rxode2lincmt_0.1.0.tar.gz(r-4.7-arm64)rxode2lincmt_0.1.0.tar.gz(r-4.7-x86_64)rxode2lincmt_0.1.0.tar.gz(r-4.6-arm64)rxode2lincmt_0.1.0.tar.gz(r-4.6-x86_64)
rxode2lincmt_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rxode2lincmt/json (API)
| # Install 'rxode2lincmt' in R: |
| install.packages('rxode2lincmt', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nlmixr2/rxode2lincmt/issues
Pkgdown/docs site:https://nlmixr2.github.io
Last updated from:44b2078510. Checks:2 ERROR, 8 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | ERROR | 330 | ||
| linux-devel-x86_64 | OK | 272 | ||
| source / vignettes | OK | 406 | ||
| linux-release-arm64 | ERROR | 333 | ||
| linux-release-x86_64 | OK | 299 | ||
| windows-devel-arm64 | OK | 332 | ||
| windows-devel-x86_64 | OK | 549 | ||
| windows-release-arm64 | OK | 348 | ||
| windows-release-x86_64 | OK | 461 | ||
| wasm-release | OK | 205 |
Exports:.calcDerived.linCmtBSensTypesSeen.linCmtBThreadsSeen.linCmtCarryFastStats.linCmtCarryLiveTest.linCmtCarrySentinelMax.linCmtCarrySetFast.linCmtDeltaMemo.linCmtSeqStats.rxode2lincmtHostFieldNames.rxode2lincmtHostInfo.rxode2lincmtIniHost.rxode2lincmtPtrlinCmtMicroslinCmtModelDoublesolComp2solComp3
Dependencies:backportsBHcheckmateRcppRcppEigenRcppParallelStanHeaders
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Micro-constants of a linear compartment model | linCmtMicros |
| Advance a linear compartment model by one step | linCmtModelDouble |
| Eigenvalues and coefficients of the two compartment model | solComp2 |
| Eigenvalues and coefficients of the three compartment model | solComp3 |