Package: rocbc 3.2.0

Benjamin Brewer

rocbc: Statistical Inference for Box-Cox Based Receiver Operating Characteristic Curves

Generation of Box-Cox based ROC curves and several aspects of inferences and hypothesis testing. Can be used when inferences for one biomarker (Bantis LE, Nakas CT, Reiser B. (2018)<doi:10.1002/bimj.201700107>) are of interest or when comparisons of two correlated biomarkers (Bantis LE, Nakas CT, Reiser B. (2021)<doi:10.1002/bimj.202000128>) are of interest. Provides inferences and comparisons around the AUC, the Youden index, the sensitivity at a given specificity level (and vice versa), the optimal operating point of the ROC curve (in the Youden sense), and the Youden based cutoff.

Authors:Leonidas Bantis [aut], Benjamin Brewer [cre, ctb], Christos Nakas [ctb], Benjamin Reiser [ctb]

rocbc_3.2.0.tar.gz
rocbc_3.2.0.tar.gz(r-4.7-any)rocbc_3.2.0.tar.gz(r-4.6-any)
rocbc_3.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
rocbc/json (API)

# Install 'rocbc' in R:

install.packages('rocbc', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.00 score 3 scripts 333 downloads 10 exports 59 dependencies

Last updated from:db9b8c27d7. Checks:4 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	178
source / vignettes	OK	216
linux-release-x86_64	OK	176
wasm-release	OK	120

Exports:checkboxcox checkboxcox2 comparebcAUC comparebcJ comparebcSens comparebcSpec rocboxcox rocboxcoxCI threerocs threerocs2

Dependencies:base64enc bslib cachem cli clinfun cpp11 crayon digest evaluate farver fastmap fontawesome formattable fs ggplot2 glue gtable highr hms htmltools htmlwidgets isoband jquerylib jsonlite knitr labeling lattice lifecycle magrittr memoise mime MRMCaov mvtnorm pillar pkgconfig pracma prettyunits pROC progress R6 rappdirs RColorBrewer Rcpp rlang rmarkdown S7 sass scales sp splancs tibble tinytex trust utf8 vctrs viridisLite withr xfun yaml

rocbc

About the rocbc Package

Rendered fromdocumentation_rocbc.Rmdusingknitr::knitr

Last update: 2024-04-23
Started: 2022-09-20

Help page	Topics
Tests whether Box-Cox is appropriate for the given dataset (one-marker version)	checkboxcox
Tests whether Box-Cox is appropriate for the given dataset (two-marker version)	checkboxcox2
Performs inference to compare the AUCs of two correlated (or uncorrelated) Box-Cox transformed biomarkers at a given nominal level	comparebcAUC
Performs inference to compare the Youden Indices of two correlated (or uncorrelated) Box-Cox transformed biomarkers at a given nominal level	comparebcJ
Performs inference to compare the sensitivities of two correlated (or uncorrelated) Box-Cox transformed biomarkers at a given specificty and a given nominal level	comparebcSens
Performs inference to compare the specificities of two correlated (or uncorrelated) Box-Cox transformed biomarkers at a given sensitivity and a given nominal level	comparebcSpec
Comprehensive Box-Cox ROC analysis for a single marker	rocboxcox
Inference around the sensitivity at a given specificity (and vice versa) for a single Box-Cox transformed biomarker	rocboxcoxCI
Provides visual comparison of three ROC estimation methods (one-marker version)	threerocs
Provides visual comparison of three ROC estimation methods (two-marker version)	threerocs2

Package: rocbc 3.2.0

rocbc: Statistical Inference for Box-Cox Based Receiver Operating Characteristic Curves

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Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)