Package: rWCVP 1.2.4

Matilda Brown

rWCVP: Generating Summaries, Reports and Plots from the World Checklist of Vascular Plants

A companion to the World Checklist of Vascular Plants (WCVP). It includes functions to generate maps and species lists, as well as match names to the WCVP. For more details and to cite the package, see: Brown M.J.M., Walker B.E., Black N., Govaerts R., Ondo I., Turner R., Nic Lughadha E. (in press). "rWCVP: A companion R package to the World Checklist of Vascular Plants". New Phytologist.

Authors:Matilda Brown [aut, cre], Barnaby Walker [aut]

rWCVP_1.2.4.tar.gz
rWCVP_1.2.4.zip(r-4.7-any)rWCVP_1.2.4.zip(r-4.6-any)
rWCVP_1.2.4.tar.gz(r-4.7-any)rWCVP_1.2.4.tar.gz(r-4.6-any)
rWCVP_1.2.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rWCVP/json (API)

# Install 'rWCVP' in R:

install.packages('rWCVP', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/matildabrown/rwcvp/issues

Pkgdown/docs site:https://matildabrown.github.io

Datasets:

redlist_example - Example dataset for name matching
taxonomic_mapping - Data for mapping plant family to order or higher classification
wgsrpd_mapping - Data for mapping WGSRPD geography to other levels
wgsrpd3 - Biodiversity Information Standards

On CRAN:

4.08 score 1 packages 81 scripts 83 downloads 20 exports 104 dependencies

Last updated from:60ed542ef3. Checks:4 ERROR, 2 OK. Indexed: yes.
A new build is currently in progress.

Target	Result	Time
linux-devel	ERROR	375
source / vignettes	OK	257
linux-release	ERROR	379
windows-devel	ERROR	579
windows-release	ERROR	504
wasm-release	OK	491

Exports:%>%edit_match get_area_name get_wgsrpd3_codes phonetic_match powo_map powo_pal scale_color_powo scale_colour_powo scale_fill_powo wcvp_checklist wcvp_distribution wcvp_distribution_map wcvp_match_exact wcvp_match_fuzzy wcvp_match_names wcvp_occ_mat wcvp_reformat wcvp_summary wcvp_summary_gt

Dependencies:base64enc bigD bit bit64 bitops blob bslib cachem class classInt cli codetools commonmark cpp11 curl data.table DBI diagram digest dplyr e1071 evaluate evd farver fastmap ff fontawesome fs future future.apply generics ggplot2 globals glue gt gtable highr htmltools htmlwidgets ipred isoband jquerylib jsonlite juicyjuice KernSmooth knitr labeling lattice lava lifecycle listenv litedown magrittr markdown MASS Matrix memoise mime nnet numDeriv parallelly phonics pillar pkgconfig prodlim progressr proxy purrr R6 rappdirs RColorBrewer Rcpp reactable reactR RecordLinkage rlang rmarkdown rpart RSQLite s2 S7 sass scales sf shape SQUAREM stringi stringr survival tibble tidyr tidyselect tinytex units utf8 V8 vctrs viridisLite withr wk xfun xml2 xtable yaml

Introduction to rWCVP

Accessing the WCVP | Filtering the WCVP | A note on filtering by taxon | A note on filtering by area

Rendered fromrWCVP.Rmdusingknitr::rmarkdown

Last update: 2023-02-16
Started: 2023-02-16

Citation

Readme and manuals

Help Manual

Help page	Topics
Get area description from vector of area codes	get_area_name
Extract WGSRPD Level 3 (area) codes.	get_wgsrpd3_codes
Plot a POWO style map for given range and range centroids.	powo_map
POWO colour palette for range maps	powo_pal scale_color_powo scale_colour_powo scale_fill_powo
Example dataset for name matching	redlist_example
Data for mapping plant family to order or higher classification	taxonomic_mapping
Generate a species checklist from WCVP	wcvp_checklist
Generate spatial distribution objects for species, genera or families	wcvp_distribution
Plot distribution maps for species, genera or families	wcvp_distribution_map
Exact matching to WCVP.	wcvp_match_exact
Fuzzy (approximate) matching to the WCVP.	edit_match phonetic_match wcvp_match_fuzzy
Match names to the WCVP.	wcvp_match_names
Generate occurrence matrix for taxa and areas	wcvp_occ_mat
Reformat local versions of WCVP	wcvp_reformat
Generate a summary table from the WCVP	wcvp_summary
Render a summary table from wcvp_summary	wcvp_summary_gt
Data for mapping WGSRPD geography to other levels	wgsrpd_mapping
Biodiversity Information Standards (TDWG) World Geographical Scheme for Recording Plant Distributions (WGSRPD)	wgsrpd3

Package: rWCVP 1.2.4

rWCVP: Generating Summaries, Reports and Plots from the World Checklist of Vascular Plants

Citation

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)