Package: rTwig 1.3.0

Aidan Morales

rTwig: Realistic Quantitative Structure Models

Real Twig is a method to correct branch overestimation in quantitative structure models. Overestimated cylinders are correctly tapered using measured twig diameters of corresponding tree species. Supported quantitative structure modeling software includes 'TreeQSM', 'SimpleForest', 'Treegraph', and 'aRchi'. Also included is a novel database of twig diameters and tools for fractal analysis of point clouds.

Authors:Aidan Morales [aut, cre, cph], David W. MacFarlane [aut, cph]

rTwig_1.3.0.tar.gz
rTwig_1.3.0.tar.gz(r-4.5-noble)rTwig_1.3.0.tar.gz(r-4.4-noble)
rTwig_1.3.0.tgz(r-4.4-emscripten)rTwig_1.3.0.tgz(r-4.3-emscripten)
rTwig.pdf |rTwig.html
rTwig/json (API)
NEWS

# Install 'rTwig' in R:
install.packages('rTwig', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/aidanmorales/rtwig/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

cpp

4.12 score 11 scripts 411 downloads 15 exports 66 dependencies

Last updated 4 days agofrom:2631790a0a. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 25 2024
R-4.5-linux-x86_64OKNov 25 2024

Exports:box_dimensioncluster_cloudcorrect_radiiexport_matexport_meshimport_qsmimport_treegraphplot_qsmprune_qsmqsm_summaryrun_rtwigsmooth_qsmstandardize_qsmtree_metricsupdate_cylinders

Dependencies:abindbase64encBHbslibcachemclicobscolourvaluescpp11data.tabledigestevaluatefansifastmapfontawesomefsgeometrygluehighrhtmltoolshtmlwidgetsigraphjquerylibjsonliteknitrlatticelifecyclelinproglpSolvemagicmagrittrMASSMatrixMatrixModelsmemoisemimepillarpkgconfigquantregR.matlabR.methodsS3R.ooR.utilsR6rappdirsrbibutilsRcppRcppArmadilloRcppProgressRcppSimdJsonRdpackrglrlangrmarkdownrmatiosassSparseMsurvivaltidyselecttidytabletinytexutf8vctrswithrxfunyaml

Box-Dimension

Rendered fromBox-Dimension.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-21
Started: 2024-04-09

Dictionary

Rendered fromDictionary.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-08
Started: 2024-08-21

Metrics

Rendered fromMetrics.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-08
Started: 2024-08-21

Overview

Rendered fromOverview.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-08
Started: 2024-08-21

Twigs

Rendered fromTwigs.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-08-21
Started: 2024-04-09

Validation

Rendered fromValidation.Rmdusingknitr::rmarkdownon Nov 25 2024.

Last update: 2024-11-21
Started: 2024-08-21

Readme and manuals

Help Manual

Help pageTopics
Box Dimensionbox_dimension
Cluster Cloudcluster_cloud
Correct Radiicorrect_radii
Export MATexport_mat
Export Meshexport_mesh
Import TreeQSMimport_qsm
Import Treegraphimport_treegraph
Plot QSMplot_qsm
Prune QSMprune_qsm
QSM Summaryqsm_summary
Run Real Twigrun_rtwig
Smooth QSMsmooth_qsm
Standardize QSMstandardize_qsm
Tree Metricstree_metrics
Twig Databasetwigs
Update Cylindersupdate_cylinders