Package: rPDBapi 2.1.1
Selcuk Korkmaz
rPDBapi: A Comprehensive Interface for Accessing the Protein Data Bank
Streamlines the interaction with the 'RCSB' Protein Data Bank ('PDB') <https://www.rcsb.org/>. This interface offers an intuitive and powerful tool for searching and retrieving a diverse range of data types from the 'PDB'. It includes advanced functionalities like BLAST and sequence motif queries. Built upon the existing XML-based API of the 'PDB', it simplifies the creation of custom requests, thereby enhancing usability and flexibility for researchers.
Authors:
rPDBapi_2.1.1.tar.gz
rPDBapi_2.1.1.tar.gz(r-4.5-noble)rPDBapi_2.1.1.tar.gz(r-4.4-noble)
rPDBapi_2.1.1.tgz(r-4.4-emscripten)rPDBapi_2.1.1.tgz(r-4.3-emscripten)
rPDBapi.pdf |rPDBapi.html✨
rPDBapi/json (API)
# Install 'rPDBapi' in R: |
install.packages('rPDBapi', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:42ed14edda. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 20 2024 |
R-4.5-linux | OK | Nov 20 2024 |
Exports:add_propertyautoresolve_sequence_typeChemicalOperatorComparisonOperatorContainsPhraseOperatorContainsWordsOperatordata_fetcherDefaultOperatordescribe_chemicalExactMatchOperatorExistsOperatorfind_papersfind_resultsgenerate_json_queryget_fasta_from_rcsb_entryget_infoget_pdb_api_urlget_pdb_filehandle_api_errorsinfer_search_serviceInOperatorparse_responseperform_searchquery_searchQueryGroupQueryNodeRangeOperatorRequestOptionsreturn_data_as_dataframeScoredResultsearch_graphqlsend_api_requestSeqMotifOperatorSequenceOperatorStructureOperator
Dependencies:askpassbio3dbriocallrclicrayoncurldescdiffobjdigestdplyrevaluatefansifsgenericsgluehttrjsonlitelifecyclemagrittrmimeopensslpillarpkgbuildpkgconfigpkgloadpraiseprocessxpspurrrR6Rcpprlangrprojrootsystestthattibbletidyselectutf8vctrswaldowithrxml2