Package: rNeighborQTL 1.1.2
Yasuhiro Sato
rNeighborQTL: Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects
To enable quantitative trait loci mapping of neighbor effects, this package extends a single-marker regression to interval mapping. The theoretical background of the method is described in Sato et al. (2021) <doi:10.1093/g3journal/jkab017>.
Authors:
rNeighborQTL_1.1.2.tar.gz
rNeighborQTL_1.1.2.tar.gz(r-4.5-noble)rNeighborQTL_1.1.2.tar.gz(r-4.4-noble)
rNeighborQTL_1.1.2.tgz(r-4.4-emscripten)rNeighborQTL_1.1.2.tgz(r-4.3-emscripten)
rNeighborQTL.pdf |rNeighborQTL.html✨
rNeighborQTL/json (API)
| # Install 'rNeighborQTL' in R: |
| install.packages('rNeighborQTL', repos = 'https://cloud.r-project.org') |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 years agofrom:7ccb50985b. Checks:1 OK, 2 NOTE. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 23 2025 |
| R-4.5-linux | NOTE | Mar 23 2025 |
| R-4.4-linux | NOTE | Mar 23 2025 |
Exports:calc_pveeff_neighborint_neighbormin_distperm_neighborplot_neiscan_neighborsim_nei_qtl
Dependencies:gastonlatticeMatrixqtlRcppRcppEigenRcppParallel
Citation
To cite rNeighborQTL in publications use:
Sato Y, Takeda K, Nagano AJ (2021) Neighbor QTL: an interval mapping method for quantitative trait loci underlying plant neighborhood effects. G3; Genes|Genomes|Genetics 11(2):jkab017. https://doi.org/10.1093/g3journal/jkab017
Corresponding BibTeX entry:
@Article{,
title = {Neighbor QTL: an interval mapping method for quantitative
trait loci underlying plant neighborhood effects},
author = {Yasuhiro Sato and Kazuya Takeda and Atsushi J. Nagano},
journal = {G3; Genes|Genomes|Genetics},
volume = {11},
number = {2},
year = {2021},
doi = {10.1093/g3journal/jkab017},
url = {https://doi.org/10.1093/g3journal/jkab017},
}