Package: rNeighborGWAS 1.2.4

Yasuhiro Sato

rNeighborGWAS: Testing Neighbor Effects in Marker-Based Regressions

To incorporate neighbor genotypic identity into genome-wide association studies, the package provides a set of functions for variation partitioning and association mapping. The theoretical background of the method is described in Sato et al. (2021) <doi:10.1038/s41437-020-00401-w>.

Authors:Yasuhiro Sato [aut, cre], Eiji Yamamoto [aut], Kentaro K. Shimizu [aut], Atsushi J. Nagano [aut]

rNeighborGWAS_1.2.4.tar.gz
rNeighborGWAS_1.2.4.tar.gz(r-4.5-noble)rNeighborGWAS_1.2.4.tar.gz(r-4.4-noble)
rNeighborGWAS_1.2.4.tgz(r-4.4-emscripten)rNeighborGWAS_1.2.4.tgz(r-4.3-emscripten)
rNeighborGWAS.pdf |rNeighborGWAS.html✨
rNeighborGWAS/json (API)

# Install 'rNeighborGWAS' in R:
install.packages('rNeighborGWAS', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

9 exports 0.61 score 6 dependencies 2 mentions 15 scripts 207 downloads

Last updated 3 years agofrom:febf1af3f2. Checks:OK: 1 NOTE: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 30 2024
R-4.5-linuxNOTEAug 30 2024

Exports:calc_PVEneidelta_PVEgaston2neiGWASmin_distnei_covalnei_lmnei_lmmnei_simuneiGWAS

Dependencies:gastonlatticeMatrixRcppRcppEigenRcppParallel

rNeighborGWAS

Rendered fromrNeighborGWAS.Rmdusingknitr::rmarkdownon Aug 30 2024.

Last update: 2021-04-07
Started: 2020-04-15