Package: qPRAentry 0.1.0
Martina Cendoya
qPRAentry: Quantitative Pest Risk Assessment at the Entry Step
Supports risk assessors in performing the entry step of the quantitative Pest Risk Assessment. It allows the estimation of the amount of a plant pest entering a risk assessment area (in terms of founder populations) through the calculation of the imported commodities that could be potential pathways of pest entry, and the development of a pathway model. Two 'Shiny' apps based on the functionalities of the package are included, that simplify the process of assessing the risk of entry of plant pests. The approach is based on the work of the European Food Safety Authority (EFSA PLH Panel et al., 2018) <doi:10.2903/j.efsa.2018.5350>.
Authors:
qPRAentry_0.1.0.tar.gz
qPRAentry_0.1.0.tar.gz(r-4.5-noble)qPRAentry_0.1.0.tar.gz(r-4.4-noble)
qPRAentry_0.1.0.tgz(r-4.4-emscripten)qPRAentry_0.1.0.tgz(r-4.3-emscripten)
qPRAentry.pdf |qPRAentry.html✨
qPRAentry/json (API)
NEWS
| # Install 'qPRAentry' in R: |
| install.packages('qPRAentry', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- datatrade_EU - Example Trade Data for the European Union
- datatrade_NorthAm - Example Trade Data for Northern America
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 1 months agofrom:00f4aba46e. Checks:2 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 16 2025 |
| R-4.5-linux | OK | Jan 16 2025 |
Exports:load_csvntradentrade_apppathway_apppathway_modelplot_countriesplot_nutsredist_isoredist_nutstrade_data
Dependencies:askpassassertthatbackportsbase64encbibtexbitbit64bslibbspluscachemcellrangerclassclassIntclicliprcolorspacecommonmarkcountrycodecpp11crayoncrosstalkcurldata.tableDBIdigestdplyrDTe1071eurostatevaluatefansifarverfastmapfontawesomefsgenericsgeojsonsfgeometriesggiraphggplot2giscoRgluegtableherehighrhmshtmltoolshtmlwidgetshttpuvhttrhttr2isobandISOweekjquerylibjsonifyjsonliteKernSmoothknitrlabelinglaterlatticelazyevallifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplyrprettyunitsprogresspromisesproxypurrrR6rapidjsonrrappdirsRColorBrewerRcppreadrreadxlRefManageRregionsrematchrlangrmarkdownrprojroots2sassscalessfsfheadersshinyshinycssloadersshinyjsshinyWidgetssourcetoolsstringistringrsyssystemfontstibbletidyrtidyselecttimechangetinytextzdbunitsutf8uuidvctrsviridisLitevroomwithrwkxfunxml2xtableyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Example Trade Data for the European Union | datatrade_EU |
| Example Trade Data for Northern America | datatrade_NorthAm |
| Load a CSV file with automatic separator detection | load_csv |
| Ntrade calculation | ntrade |
| Shiny app for Ntrade | ntrade_app |
| Shiny app for pathway model | pathway_app |
| Pathway model | pathway_model |
| Plot values on a map at country level | plot_countries |
| Plot NUTS region values on a map | plot_nuts |
| Data redistribution to country subdivisions | redist_iso |
| Data redistribution to NUTS subdivisions | redist_nuts |
| Prepare Trade Data | trade_data |