Package: purgeR 1.8.2
Eugenio López-Cortegano
purgeR: Inbreeding-Purging Estimation in Pedigreed Populations
Inbreeding-purging analysis of pedigreed populations, including the computation of the inbreeding coefficient, partial, ancestral and purged inbreeding coefficients, and measures of the opportunity of purging related to the individual reduction of inbreeding load. In addition, functions to calculate the effective population size and other parameters relevant to population genetics are included. See López-Cortegano E. (2021) <doi:10.1093/bioinformatics/btab599>.
Authors:
purgeR_1.8.2.tar.gz
purgeR_1.8.2.tar.gz(r-4.5-noble)purgeR_1.8.2.tar.gz(r-4.4-noble)
purgeR_1.8.2.tgz(r-4.4-emscripten)purgeR_1.8.2.tgz(r-4.3-emscripten)
purgeR.pdf |purgeR.html✨
purgeR/json (API)
NEWS
# Install 'purgeR' in R: |
install.packages('purgeR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://gitlab.com/elcortegano/purger
Last updated 10 months agofrom:724e6f6e15. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 25 2024 |
R-4.5-linux-x86_64 | OK | Aug 25 2024 |
Exports:exp_Fexp_Faexp_gip_Fip_Faip_Fijip_gip_opped_cleanped_graphped_maternalped_renameped_sortpop_hwdpop_Napop_Naepop_Nancestorspop_Nepop_Nfpop_Nfepop_Ngpop_tw_grandoffspringw_offspringw_reproductive_value
Dependencies:clicodetoolscrayondoSNOWforeachgluehmsiteratorslifecyclepkgconfigprettyunitsprogressR6RcppRcppProgressrlangsnowvctrs