Package: pguIMP 0.1.1
Jorn Lotsch
pguIMP: Visually Guided Preprocessing of Bioanalytical Laboratory Data
Reproducible cleaning of biomedical laboratory data using visualization, error correction, and transformation methods implemented as interactive R notebooks. A detailed description of the methods ca ben found in Malkusch, S., Hahnefeld, L., Gurke, R. and J. Lotsch. (2021) <doi:10.1002/psp4.12704>.
Authors:
pguIMP_0.1.1.tar.gz
pguIMP_0.1.1.zip(r-4.7-any)pguIMP_0.1.1.zip(r-4.6-any)
pguIMP_0.1.1.tar.gz(r-4.7-any)pguIMP_0.1.1.tar.gz(r-4.6-any)
pguIMP_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
pguIMP/json (API)
| # Install 'pguIMP' in R: |
| install.packages('pguIMP', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jornlotsch/pguimp/issues
Last updated from:64975f246d. Checks:6 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 243 | ||
| source / vignettes | OK | 270 | ||
| linux-release | OK | 236 | ||
| windows-devel | OK | 221 | ||
| windows-release | OK | 191 | ||
| wasm-release | OK | 160 |
Exports:centralValuedLogLikelihoodimportDataSetknnImputationnnknormalDistributionpgu.correlatorpgu.corrValidatorpgu.datapgu.delegatepgu.explorerpgu.exporterpgu.filepgu.filterpgu.importerpgu.imputationpgu.limitsOfQuantificationpgu.missingspgu.missingsCharacterizerpgu.modelpgu.normalizerpgu.normDistpgu.optimizerpgu.outlierspgu.regressorpgu.reporterpgu.statuspgu.transformatorpgu.validatorpguIMPsLogLikelihoodtransposeTibble
Dependencies:askpassbackportsbase64encbbmlebdsmatrixbitbit64bootbroombslibcachemcellrangercheckmateclassclicliprclustercodetoolscoincolorspacecommonmarkcowplotcpp11crayoncrosstalkcurldata.tableDataVisualizationsdbscanDEoptimRDescToolsdigestdplyrDTe1071evaluateExactexpmfarverfastmapfinalfitfit.modelsfontawesomeforcatsforeachforeignFormulafsgenericsGGallyggplot2ggstatsggthemesgldglmnetglueGPArotationgridExtragtablehavenhighrHmischmshtmlTablehtmltoolshtmlwidgetshttpuvhttrisobanditeratorsjomojquerylibjsonliteknitrlabelinglaekenlaterlatticelazyevallibcoinlifecyclelme4lmomlmtestmagrittrMASSMatrixmatrixStatsmemoisemicemimeminqamitmlmnormtmodeltoolsmultcompmultcompViewmvtnormnlmenloptrnnetnortestnumDerivopensslordinaloteloutlierspanpatchworkpcaPPpillarpkgconfigplotlyplyrpracmaprettyunitspROCprogresspromisesproxypsychpurrrR6rangerrappdirsrbibutilsRColorBrewerrcompanionRcppRcppEigenRcppParallelRdpackreadrreadxlreformulasrematchreshape2rJavarlangrmarkdownrobustrobustbaserootSolverpartrrcovrstudioapiRWekaRWekajarsS7sandwichsassscalesshapeshinysourcetoolsspstringistringrsurvivalsysTH.datatibbletidyrtidyselecttinytextzdbucminfutf8vcdvctrsVIMviridisLitevroomwithrwritexlxfunxgboostxtableyamlzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Visually Guided Preprocessing of Bioanalytical Laboratory Data | pguIMP-package |
| centralValue | centralValue |
| dLogLikelihood | dLogLikelihood |
| importDataSet | importDataSet |
| knnImputation | knnImputation |
| nnk | nnk |
| normalDistribution | normalDistribution |
| pgu.correlator | pgu.correlator |
| pgu.corrValidator | pgu.corrValidator |
| pgu.data | pgu.data |
| pgu.delegate | pgu.delegate |
| pgu.explorer | pgu.explorer |
| pgu.exporter | pgu.exporter |
| pgu.fie | pgu.file |
| pgu.filter | pgu.filter |
| pgu.importer | pgu.importer |
| pgu.imputation | pgu.imputation |
| pgu.limitsOfQuantification | pgu.limitsOfQuantification |
| pgu.missings | pgu.missings |
| pgu.missingsCharacterizer | pgu.missingsCharacterizer |
| pgu.model | pgu.model |
| pgu.normalizer | pgu.normalizer |
| pgu.normDist | pgu.normDist |
| pgu.optimizer | pgu.optimizer |
| pgu.outliers | pgu.outliers |
| pgu.regressor | pgu.regressor |
| pgu.reporter | pgu.reporter |
| pgu.status | pgu.status |
| pgu.transformator | pgu.transformator |
| pgu.validator | pgu.validator |
| pguIMP | pguIMP |
| dLogLikelihood | sLogLikelihood |
| transposeTibble | transposeTibble |