This package is considered a duplicate. The official version of this package is found at:https://juliengamartin.r-universe.dev/pedtricks

Package: pedtricks 0.4.2

Julien Martin

pedtricks: Visualize, Summarize and Simulate Data from Pedigrees

Sensitivity and power analysis, for calculating statistics describing pedigrees from wild populations, and for visualizing pedigrees.

Authors:Julien Martin [aut, cre], Matthew Wolak [aut], Susan Johnston [aut], Michael Morrissey [aut]

# Install 'pedtricks' in R:

install.packages('pedtricks', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

Last updated 4 months agofrom:bfeaf46b57. Checks:2 OK. Indexed: no.

Target	Result	Latest binary
Doc / Vignettes	OK	Jan 08 2025
R-4.5-linux	OK	Jan 08 2025

Help page	Topics
Converts a pedigree with individuals specified as factors to a numeric pedigree	convert_ped
Produce a graphical representation of a pedigree	draw_ped
Produce a graphical representation of the relatedness matrix of a pedigree	draw_pedA
Manipulating pedigrees to prepare them for requirements of subsequent analyses Prepares a pedigree to conform with requirements of many softwares used in quantitative genetic analysis, as well as for many of the functions in pedtricks.	fix_ped
A function to simulate QTL and/or SNP data.	genome_sim
ggpedigree: Plotting tool for simple and complex pedigrees.	ggpedigree
Example dataset for pedtricks examples and tutorial	gryphons
Simulates microsatellite data across a pedigree.	micro_sim
Calculates a range of statistics of pedigrees	pedigreeStats ped_stats
A function to simulated phenotypic data	phen_sim
Plot output from ped_stats	plot.ped_stats
Post-processes output from ped_stats	summary.ped_stats
Seychelles Warbler Genotypes	WarblerG