Package: parmigene 1.1.1

Gabriele Sales

parmigene: Parallel Mutual Information Estimation for Gene Network Reconstruction

Parallel estimation of the mutual information based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks (Sales et al, 2011 <doi:10.1093/bioinformatics/btr274>).

Authors:Gabriele Sales [aut, cre], Chiara Romualdi [aut]

parmigene_1.1.1.tar.gz
parmigene_1.1.1.tar.gz(r-4.5-noble)parmigene_1.1.1.tar.gz(r-4.4-noble)
parmigene_1.1.1.tgz(r-4.4-emscripten)parmigene_1.1.1.tgz(r-4.3-emscripten)
parmigene.pdf |parmigene.html
parmigene/json (API)

# Install 'parmigene' in R:
install.packages('parmigene', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/sales-lab/parmigene/issues

Uses libs:
  • openmp– GCC OpenMP (GOMP) support library

4.32 score 4 packages 35 scripts 934 downloads 16 mentions 7 exports 0 dependencies

Last updated 2 months agofrom:d988e7a874. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-linux-x86_64OKNov 21 2024

Exports:aracne.aaracne.mclrknnmiknnmi.allknnmi.crossmrnet

Dependencies: