Package: pairwiseCI 0.1-27

Frank Schaarschmidt

pairwiseCI: Confidence Intervals for Two Sample Comparisons

Calculation of the parametric, nonparametric confidence intervals for the difference or ratio of location parameters, nonparametric confidence interval for the Behrens-Fisher problem and for the difference, ratio and odds-ratio of binomial proportions for comparison of independent samples. Common wrapper functions to split data sets and apply confidence intervals or tests to these subsets. A by-statement allows calculation of CI separately for the levels of further factors. CI are not adjusted for multiplicity.

Authors:Frank Schaarschmidt [aut, cre], Daniel Gerhard [aut]

pairwiseCI_0.1-27.tar.gz
pairwiseCI_0.1-27.tar.gz(r-4.5-noble)pairwiseCI_0.1-27.tar.gz(r-4.4-noble)
pairwiseCI_0.1-27.tgz(r-4.4-emscripten)pairwiseCI_0.1-27.tgz(r-4.3-emscripten)
pairwiseCI.pdf |pairwiseCI.html✨
pairwiseCI/json (API)

# Install 'pairwiseCI' in R:
install.packages('pairwiseCI', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • Oats - The Oats data set
  • behenic - Measurements of behenic acid in two samples
  • cabbage - Yield of cabbage in one-factorial field trial
  • repellent - Repellent effect of sulphur in eight concentrations
  • rooting - Rooting (success/failure) of plants in a 3-factorial field trial
  • sodium - Sodium contents in transgenic and isogenic corn

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

26 exports 0.61 score 53 dependencies 2 mentions 65 scripts 385 downloads

Last updated 6 years agofrom:600fb0d96c. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-linuxOKAug 24 2024

Exports:Betabin.ratioHL.diffHL.ratioLognorm.diffLognorm.ratioMedian.diffMedian.ratioMOVERRNegbin.rationp.reODbin.ratiopairwiseCIpairwiseMEPpairwiseMEP.data.framepairwiseTestParam.diffParam.ratioplotCI.pairwiseMEPPoisson.ratioProp.diffProp.orProp.ratioProp.testQBmoverQuasibin.ratioQuasipoisson.ratio

Dependencies:abindbootclicodacodetoolscoincolorspacefansifarverggplot2gluegtableisobandlabelinglatticelibcoinlifecyclemagicmagrittrMASSMatrixMatrixModelsmatrixStatsmcmcMCMCpackMCPANmcprofilemgcvmodeltoolsmultcompmunsellmvtnormnlmepillarpkgconfigplyrquadprogquantregR6RColorBrewerRcpprlangsandwichscalesSparseMsurvivalTH.datatibbleutf8vctrsviridisLitewithrzoo

Readme and manuals

Help Manual

Help pageTopics
Wrapper functions for two-sample confidence intervals and tests.pairwiseCI-package
Coercing pairwiseCI objects to data.framesas.data.frame.pairwiseCI
Coerce pairwiseMEP objects to data.framesas.data.frame.pairwiseMEP
Measurements of behenic acid in two samplesbehenic
Yield of cabbage in one-factorial field trialcabbage
MOVER-R method by Donner and Zhou (2012)MOVERR
Nonparametric test and confidence interval based on relative effectsnp.re
The Oats data setOats
Confidence intervals for risk ratios of overdispersed binomial dataBetabin.ratio ODbin.ratio Quasibin.ratio
Wrapper function for two-sample confidence intervalspairwiseCI
Internal functions for pairwiseCIpairwiseCICont pairwiseCIProp
Confidence intervals for two sample comparisons of continuous dataHD.diff HD.ratio HL.diff HL.ratio Lognorm.diff Lognorm.ratio Median.diff Median.ratio pairwiseCImethodsCont Param.diff Param.ratio
Confidence intervals for two sample comparisons of count dataNegbin.ratio pairwiseCImethodsCount Poisson.ratio Quasipoisson.ratio
Confidence intervals for two sample comparisons of binomial proportionspairwiseCImethodsProp Prop.diff Prop.or Prop.ratio
Wrapper to compute confidence intervals for multiple endpointspairwiseMEP pairwiseMEP.data.frame
Wrapper to calculate unadjusted p-values for pairwise comparisonspairwiseTest
Internal functions for pairwiseTestpairwiseTestCont pairwiseTestInt pairwiseTestProp
Plotting the output of pairwiseCIplot.pairwiseCI
Plot confidence intervalsplotCI.pairwiseCI plotCI.pairwiseMEP
Print function for "pairwiseCI"print.pairwiseCI
Print function for "pairwiseTest"print.pairwiseTest
Print function for "summary.pairwiseCI"print.summary.pairwiseCI
Print function for "summary.pairwiseTest"print.summary.pairwiseTest
Construct a (quasi-) likelihood-profileprofileDG
Wrapper to prop.test(stats)Prop.test
Confidence intervals for ratios of proportions based on the quasibinomial assumptionQBmover
Repellent effect of sulphur in eight concentrationsrepellent
Rooting (success/failure) of plants in a 3-factorial field trialrooting
Sodium contents in transgenic and isogenic cornsodium
Summary function for pairwiseCIsummary.pairwiseCI
Summary function for "pairwiseTest"summary.pairwiseTest