Package: pairscale 1.0

Frank Koopmans

pairscale: Pairwise Rescaling of Numeric Matrices

Normalization of numerical matrices by minimizing the mean/median/mode difference between all column pairs.

Authors:Frank Koopmans [aut, cre]

# Install 'pairscale' in R:

install.packages('pairscale', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

On CRAN:

Last updated from:3b93f90a87. Checks:6 OK. Indexed: yes.

Target	Result	Time
linux-devel-arm64	OK	186
linux-devel-x86_64	OK	163
source / vignettes	OK	233
linux-release-arm64	OK	184
linux-release-x86_64	OK	217
wasm-release	OK	134

Dependencies:Rcpp RcppArmadillo

Help page	Topics
Distance matrix between columns of a matrix using their MAD-trimmed mean differences	pairdiff_madmean
Distance matrix between columns of a matrix using their mean differences	pairdiff_mean
Distance matrix between columns of a matrix using their trimmed median differences	pairdiff_median
Distance matrix between columns of a matrix using their mode differences	pairdiff_mode
Distance matrix between columns of a matrix using their trimmed mean differences	pairdiff_trimmedmean
Normalize matrix columns using their MAD-trimmed mean differences	pairscale_madmean
Normalize matrix columns using their mean differences	pairscale_mean
Normalize matrix columns using their median differences	pairscale_median
Normalize matrix columns using their mode differences	pairscale_mode
Normalize matrix columns using their trimmed-mean differences	pairscale_trimmedmean
graph Laplacian approach to finding normalization factors	solve_graph_laplacian
Compute MAD-trimmed mean value of a vector, with optional filtering for N datapoints	vector_madmean
Compute mean value of a vector, with optional filtering for N datapoints	vector_mean
Compute median value of a vector, with optional filtering for N datapoints	vector_median
Compute mode of a vector, with optional filtering for N datapoints	vector_mode
Compute trimmed mean value of a vector, with optional filtering for N datapoints	vector_trimmedmean