Package: openVA 1.2.0
openVA: Automated Method for Verbal Autopsy
Implements multiple existing open-source algorithms for coding cause of death from verbal autopsies. The methods implemented include 'InterVA4' by Byass et al (2012) <doi:10.3402/gha.v5i0.19281>, 'InterVA5' by Byass at al (2019) <doi:10.1186/s12916-019-1333-6>, 'InSilicoVA' by McCormick et al (2016) <doi:10.1080/01621459.2016.1152191>, 'NBC' by Miasnikof et al (2015) <doi:10.1186/s12916-015-0521-2>, and a replication of 'Tariff' method by James et al (2011) <doi:10.1186/1478-7954-9-31> and Serina, et al. (2015) <doi:10.1186/s12916-015-0527-9>. It also provides tools for data manipulation tasks commonly used in Verbal Autopsy analysis and implements easy graphical visualization of individual and population level statistics. The 'NBC' method is implemented by the 'nbc4va' package that can be installed from <https://github.com/rrwen/nbc4va>. Note that this package was not developed by authors affiliated with the Institute for Health Metrics and Evaluation and thus unintentional discrepancies may exist in the implementation of the 'Tariff' method.
Authors:
openVA_1.2.0.tar.gz
openVA_1.2.0.tar.gz(r-4.7-any)openVA_1.2.0.tar.gz(r-4.6-any)
openVA_1.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
openVA/json (API)
NEWS
| # Install 'openVA' in R: |
| install.packages('openVA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/verbal-autopsy-software/openva/issues
- DataEAVA - 1,736 records of Sample Input
- grouping_eava_child - Mapping for child causes of death to the list used by the EAVA algorithm.
- grouping_eava_neonate - Mapping for neonate causes of death to the list used by the EAVA algorithm.
- NeonatesVA5 - 200 records of Sample Input
- RandomVA6 - 1,736 records of Sample Input
Last updated from:41440b5b43. Checks:4 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 219 | ||
| source / vignettes | OK | 241 | ||
| linux-release-x86_64 | OK | 246 | ||
| wasm-release | OK | 184 |
Exports:codeVAConvertDataConvertData.phmrcCSMFCSMF5getCCCgetCSMFgetCSMF_accuracygetIndivProbgetPHMRC_urlgetTopCODinsilicoInterVAinterVA_trainInterVA5openVA_statusopenVA_updateplotVAprepCalibrationstackplotVAtariff
Dependencies:cellrangerclicodacpp11crayoncurlfarverggplot2gluegtablehmsInSilicoVAInterVA4InterVA5isobandlabelinglatticelifecyclemagrittrpillarpkgconfigprettyunitsprogressR6RColorBrewerreadxlrematchrJavarlangS7scalesTarifftibbleutf8vctrsviridisLitewithr
Expert Algorithms for Neonatal and Child Causes of Death
Rendered fromeava-vignette.html.asisusingR.rsp::asison May 22 2026.Last update: 2025-09-24
Started: 2025-09-24
Getting started with openVA
Rendered fromopenVA-vignette.html.asisusingR.rsp::asison May 22 2026.Last update: 2022-10-01
Started: 2022-10-01
VA Calibration
Rendered fromvacalibration-vignette.html.asisusingR.rsp::asison May 22 2026.Last update: 2025-09-24
Started: 2025-09-24
