Package: neuromplex 1.0-1

Surya Tokdar
neuromplex: Neural Multiplexing Analysis
Statistical methods for whole-trial and time-domain analysis of single cell neural response to multiple stimuli presented simultaneously. The package is based on the paper by C Glynn, ST Tokdar, A Zaman, VC Caruso, JT Mohl, SM Willett, and JM Groh (2021) "Analyzing second order stochasticity of neural spiking under stimuli-bundle exposure", is in press for publication by the Annals of Applied Statistics. A preprint may be found at <arxiv:1911.04387>.
Authors:
neuromplex_1.0-1.tar.gz
neuromplex_1.0-1.tar.gz(r-4.7-any)neuromplex_1.0-1.tar.gz(r-4.6-any)
neuromplex_1.0-1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
neuromplex/json (API)
| # Install 'neuromplex' in R: |
| install.packages('neuromplex', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:2ca7b60b33. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 134 | ||
| source / vignettes | OK | 173 | ||
| linux-release-x86_64 | OK | 132 | ||
| wasm-release | OK | 104 |
Exports:bin.counterdappdapp.simulatemplex.preprocesspoisson.testssynthesis.dapp
Dependencies:BayesLogitclicpp11dplyrfarvergenericsggplot2gluegridExtragtableisobandlabelinglifecyclemagrittrpillarpkgconfigpurrrR6RColorBrewerrlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Bin Counting | bin.counter |
| Dynamic Admixture of Poisson Process | dapp |
| Simulate from Dynamic Admixture of Poisson Process | dapp.simulate |
| Preprocessing Neural Multiplexing Data | mplex.preprocess |
| Plotting Method for Dynamic Admixture of Poisson Process | plot.dapp |
| Poisson Tests for Whole Trial Spike Counts | poisson.tests |
| Predict Method for Dynamic Admixture of Poisson Process | predict.dapp |
| Summary Method for Dynamic Admixture of Poisson Process | summary.dapp |
| Simulate Multiplexing Data for DAPP Analysis | synthesis.dapp |