Package: neuroimaGene 0.1.0

Xavier Bledsoe

neuroimaGene: Transcriptomic Atlas of Neuroimaging Derived Phenotypes

Contains functions to query and visualize the Neuroimaging features associated with genetically regulated gene expression (GReX). The primary utility, neuroimaGene(), relies on a list of user-defined genes and returns a table of neuroimaging features (NIDPs) associated with each gene. This resource is designed to assist in the interpretation of genome-wide and transcriptome-wide association studies that evaluate brain related traits. Bledsoe (2024) <doi:10.1016/j.ajhg.2024.06.002>. In addition there are several visualization functions that generate summary plots and 2-dimensional visualizations of regional brain measures. Mowinckel (2020).

Authors:Xavier Bledsoe [aut, cre], Eric Gamazon [aut]

neuroimaGene_0.1.0.tar.gz
neuroimaGene_0.1.0.tar.gz(r-4.5-noble)neuroimaGene_0.1.0.tar.gz(r-4.4-noble)
neuroimaGene_0.1.0.tgz(r-4.4-emscripten)neuroimaGene_0.1.0.tgz(r-4.3-emscripten)
neuroimaGene.pdf |neuroimaGene.html✨
neuroimaGene/json (API)

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

7 exports 0.00 score 57 dependencies 1 scripts 225 downloads

Last updated 3 months agofrom:977fb0a802. Checks:OK: 2. Indexed: yes.

Exports:check_dblistNIDPsneuro_visneuroimaGeneplot_gnNIDPplot_gnsplot_nidps

Dependencies:bitbit64blobcachemclassclassIntclicolorspacecpp11data.tableDBIdplyre1071fansifarverfastmapgenericsggplot2ggseggluegtableisobandKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmunsellnlmepillarpkgconfigplogrproxypurrrR6RColorBrewerRcpprlangRSQLites2scalessfstringistringrtibbletidyrtidyselectunitsutf8vctrsviridisLitewithrwk