Package: mmcif 0.1.1
Benjamin Christoffersen
mmcif: Mixed Multivariate Cumulative Incidence Functions
Fits the mixed cumulative incidence functions model suggested by <doi:10.1093/biostatistics/kxx072> which decomposes within cluster dependence of risk and timing. The estimation method supports computation in parallel using a shared memory C++ implementation. A sandwich estimator of the covariance matrix is available. Natural cubic splines are used to provide a flexible model for the cumulative incidence functions.
Authors:
mmcif_0.1.1.tar.gz
mmcif_0.1.1.tar.gz(r-4.5-noble)mmcif_0.1.1.tar.gz(r-4.4-noble)
mmcif_0.1.1.tgz(r-4.4-emscripten)mmcif_0.1.1.tgz(r-4.3-emscripten)
mmcif.pdf |mmcif.html✨
mmcif/json (API)
NEWS
| # Install 'mmcif' in R: |
| install.packages('mmcif', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/boennecd/mmcif/issues
Last updated 2 years agofrom:0e87288bdf. Checks:OK: 1 NOTE: 1. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 30 2024 |
| R-4.5-linux-x86_64 | NOTE | Dec 30 2024 |
Exports:log_chollog_chol_invmmcif_datammcif_fitmmcif_logLikmmcif_logLik_gradmmcif_pd_bivariatemmcif_pd_condmmcif_pd_univariatemmcif_sandwichmmcif_start_values
Dependencies:alabamabriocallrclicrayondescdiffobjdigestevaluatefsgluejsonlitelatticelifecyclemagrittrMatrixnumDerivpkgbuildpkgloadpraiseprocessxpspsqnR6RcppRcppArmadilloRcppEigenrlangrprojroottestthatwaldowithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Computes the Log Cholesky Decomposition and the Inverse | log_chol log_chol_inv |
| Sets up an Object to Compute the Log Composite Likelihood | mmcif_data |
| Fits a Mixed Competing Risk Model | mmcif_fit |
| Evaluates the Log Composite Likelihood and its Gradient | mmcif_logLik mmcif_logLik_grad |
| Computes Marginal Measures Using Two Observations | mmcif_pd_bivariate mmcif_pd_cond |
| Computes Marginal Measures for One Observation | mmcif_pd_univariate |
| Computes the Sandwich Estimator | mmcif_sandwich |
| Finds Staring Values | mmcif_start_values |
