Package: mixgb 1.5.2

Yongshi Deng

mixgb: Multiple Imputation Through 'XGBoost'

Multiple imputation using 'XGBoost', subsampling, and predictive mean matching as described in Deng and Lumley (2023) <doi:10.1080/10618600.2023.2252501>. The package supports various types of variables, offers flexible settings, and enables saving an imputation model to impute new data. Data processing and memory usage have been optimised to speed up the imputation process.

Authors:Yongshi Deng [aut, cre], Thomas Lumley [ths]

mixgb_1.5.2.tar.gz
mixgb_1.5.2.tar.gz(r-4.5-noble)mixgb_1.5.2.tar.gz(r-4.4-noble)
mixgb_1.5.2.tgz(r-4.4-emscripten)mixgb_1.5.2.tgz(r-4.3-emscripten)
mixgb.pdf |mixgb.html
mixgb/json (API)
NEWS

# Install 'mixgb' in R:
install.packages('mixgb', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/agnesdeng/mixgb/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library
Datasets:
  • nhanes3 - A small subset of the NHANES III (1988-1994) newborn data
  • nhanes3_newborn - NHANES III (1988-1994) newborn data

cppopenmp

3.25 score 88 scripts 268 downloads 9 exports 68 dependencies

Last updated 24 days agofrom:cfd5622958. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 02 2024
R-4.5-linux-x86_64OKDec 02 2024

Exports:%>%createNAdata_cleandefault_paramsdefault_params_cranimpute_newmixgbmixgb_cvshow_var

Dependencies:backportsbitbit64bootbroomclicliprcodetoolscpp11crayondata.tabledplyrfansiforcatsforeachgenericsglmnetgluehavenhmsiteratorsjomojsonlitelatticelifecyclelme4magrittrMASSMatrixmiceminqamitmlnlmenloptrnnetnumDerivordinalpanpillarpkgconfigprettyunitsprogresspurrrR6RcppRcppArmadilloRcppEigenRcppGSLRcppParallelRcppZigguratreadrRfastrlangrpartshapestringistringrsurvivaltibbletidyrtidyselecttzdbucminfutf8vctrsvroomwithrxgboost

Imputing newdata with a saved mixgb imputer

Rendered fromImputing-newdata.Rmdusingknitr::rmarkdownon Dec 02 2024.

Last update: 2024-12-02
Started: 2022-06-07

mixgb: Multiple Imputation Through XGBoost

Rendered fromUsing-mixgb.Rmdusingknitr::rmarkdownon Dec 02 2024.

Last update: 2024-12-02
Started: 2022-06-07