Package: megatrees 1.0.0
Daijiang Li
megatrees: Subsets of Randomly Selected Phylogenies from Existing Mega-Phylogenies
There are an increasing number of mega-phylogenies available nowadays, with many of them being sets of thousands of posterior distribution phylogenies. For ecological studies, we may need to randomly select many such posterior phylogenies to conduct analyses. This data package serves this purpose by providing a small number (100 or 50) of randomly selected posterior phylogenies (if available) so that we can readily use them for our downstream analyses without repeating the downloading and selecting processes.
Authors:
megatrees_1.0.0.tar.gz
megatrees_1.0.0.tar.gz(r-4.7-any)megatrees_1.0.0.tar.gz(r-4.6-any)
megatrees_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
megatrees/json (API)
| # Install 'megatrees' in R: |
| install.packages('megatrees', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- tree_bee - The Maximum Likely Mega-tree of Bees from Bee Tree of Life
- tree_bird_McTavish - The summary tree by McTavish et al. 2025 PNAS
- tree_butterfly - Tree of 2244 butterfly species
- tree_fish_12k - Mega-tree of 11638 Fish from The Fish Tree of Life
- tree_plant_Carruthers - Mega-tree of Plants based on Carruthers et al., 2026
- tree_plant_otl - Mega-tree of Plants based on Open Tree of Life
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:449ff35c32. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 129 | ||
| source / vignettes | OK | 252 | ||
| linux-release-x86_64 | OK | 128 | ||
| wasm-release | OK | 102 |
Exports:get_tree_amphibian_n100get_tree_bee_n100get_tree_bird_n100get_tree_fish_32k_n50get_tree_mammal_n100_phylacineget_tree_mammal_n100_vertlifeget_tree_plant_n100_Carruthersget_tree_reptile_n100get_tree_shark_ray_n100
