Package: mMPA 1.2.0

"Tao Liu, PhD"

mMPA: Implementation of Marker-Assisted Mini-Pooling with Algorithm

To determine the number of quantitative assays needed for a sample of data using pooled testing methods, which include mini-pooling (MP), MP with algorithm (MPA), and marker-assisted MPA (mMPA). To estimate the number of assays needed, the package also provides a tool to conduct Monte Carlo (MC) to simulate different orders in which the sample would be collected to form pools. Using MC avoids the dependence of the estimated number of assays on any specific ordering of the samples to form pools.

Authors:"Tao Liu, PhD <[email protected]> [aut, cre]" "Yizhen Xu, ScM <[email protected]> [aut]"

mMPA_1.2.0.tar.gz
mMPA_1.2.0.tar.gz(r-4.5-noble)mMPA_1.2.0.tar.gz(r-4.4-noble)
mMPA_1.2.0.tgz(r-4.4-emscripten)mMPA_1.2.0.tgz(r-4.3-emscripten)
mMPA.pdf |mMPA.html✨
mMPA/json (API)

# Install 'mMPA' in R:
install.packages('mMPA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.00 score 169 downloads 4 exports 0 dependencies

Last updated 6 years agofrom:c8cc32877a. Checks:2 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 29 2025
R-4.5-linuxOKJan 29 2025

Exports:minipoolmmpampapooling_mc

Dependencies:

Implementation of Marker-Assisted Mini-Pooling with Algorithm

Tao Liu, PhD and Yizhen Xu, MS, Brown University

Rendered frommy-vignette.Rmdusingknitr::rmarkdownon Jan 29 2025.

Last update: 2017-03-22
Started: 2017-03-22