Package: ludic 0.2.0

Boris P Hejblum

ludic: Linkage Using Diagnosis Codes

Probabilistic record linkage without direct identifiers using only diagnosis codes. Method is detailed in: Hejblum, Weber, Liao, Palmer, Churchill, Szolovits, Murphy, Kohane & Cai (2019) <doi:10.1038/sdata.2018.298> ; Zhang, Hejblum, Weber, Palmer, Churchill, Szolovits, Murphy, Liao, Kohane & Cai (2021) <doi:10.1101/2021.05.02.21256490>.

Authors:Boris P Hejblum [aut, cre], Harrison G Zhang [aut], Tianxi Cai [aut]

ludic_0.2.0.tar.gz
ludic_0.2.0.tar.gz(r-4.5-noble)ludic_0.2.0.tar.gz(r-4.4-noble)
ludic_0.2.0.tgz(r-4.4-emscripten)ludic_0.2.0.tgz(r-4.3-emscripten)
ludic.pdf |ludic.html
ludic/json (API)
NEWS

# Install 'ludic' in R:
install.packages('ludic', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/borishejblum/ludic/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library
Datasets:
  • RA1_11y - Anonymized binarized diagnosis codes from RA study.
  • RA1_6y - Anonymized binarized diagnosis codes from RA study.
  • RA2_11y - Anonymized binarized diagnosis codes from RA study.
  • RA2_6y - Anonymized binarized diagnosis codes from RA study.
  • silverstandard_truematches - Anonymized binarized diagnosis codes from RA study.

openblascppopenmp

1.81 score 13 scripts 724 downloads 1 mentions 19 exports 20 dependencies

Last updated 3 years agofrom:245b3ba649. Checks:OK: 1 NOTE: 1. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 08 2024
R-4.5-linux-x86_64NOTEDec 08 2024

Exports:agree_Cagree_C_sparseatlascomb_pvalsem_winklerem_winkler_bigexpitexpit_dev1logitloglikC_binloglikC_bin_wDatesloglikratioC_diff_arbitrarymatchingScore_CmatchingScore_C_sparse_bigmatchProbs_rank_full_Cpval_zscorerecordLinkstrsplitCtest_han2018

Dependencies:cvarfastICAfBasicsfGarchgbutilsgsslandpredlatticeMASSMatrixrbibutilsRcppRcppArmadilloRdpackrootSolvespatialstabledistsurvivaltimeDatetimeSeries