Package: linelistBayes 1.0
Chad Milando
linelistBayes: Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches
Provides tools for performing Bayesian inference on epidemiological data to estimate the time-varying reproductive number and other related metrics. These methods were published in Li and White (2021) <doi:10.1371/journal.pcbi.1009210>. This package supports analyses based on aggregated case count data and individual line list data, facilitating enhanced surveillance and intervention planning for infectious diseases like COVID-19.
Authors:
linelistBayes_1.0.tar.gz
linelistBayes_1.0.tar.gz(r-4.5-noble)linelistBayes_1.0.tar.gz(r-4.4-noble)
linelistBayes_1.0.tgz(r-4.4-emscripten)linelistBayes_1.0.tgz(r-4.3-emscripten)
linelistBayes.pdf |linelistBayes.html✨
linelistBayes/json (API)
| # Install 'linelistBayes' in R: |
| install.packages('linelistBayes', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- out_list_demo - Sample datasets
- sample_cases - Sample datasets
- sample_dates - Sample datasets
- sample_location - Sample datasets
- sample_onset_dates - Sample datasets
- sample_report_dates - Sample datasets
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 6 months agofrom:bb66f1d37c. Checks:OK: 2. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 01 2024 |
| R-4.5-linux-x86_64 | OK | Oct 01 2024 |
Exports:backnow_cmconvert_to_linelistcreate_caseCountscreate_linelistdnbdummyfindmissget_mu_vecgetrlambdalogLikNBplot.backnowplot.caseCountspnbproprnbrun_backnowsi
Dependencies:clicodacpp11dplyrfansigenericsgluelatticelifecyclelubridatemagrittrpillarpkgconfigR6RcppRcppArmadillorlangtibbletidyselecttimechangeutf8vctrswithr
