Package: lillies 0.2.12

Oleguer Plana-Ripoll

lillies: Estimation of Life Years Lost

Estimation of life expectancy and Life Years Lost (LYL, or lillies for short) for a given population, for example those with a given disease or condition. In addition, the package can be used to compare estimates from different populations, or to estimate confidence intervals. Technical details of the method are available in Plana-Ripoll et al. (2020) <doi:10.1371/journal.pone.0228073> and Andersen (2017) <doi:10.1002/sim.7357>.

Authors:Oleguer Plana-Ripoll [aut, cre]

lillies_0.2.12.tar.gz
lillies_0.2.12.tar.gz(r-4.5-noble)lillies_0.2.12.tar.gz(r-4.4-noble)
lillies_0.2.12.tgz(r-4.4-emscripten)lillies_0.2.12.tgz(r-4.3-emscripten)
lillies.pdf |lillies.html✨
lillies/json (API)

# Install 'lillies' in R:

install.packages('lillies', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

aggreg_data - Simulated aggregated data for Life Years Lost estimation.
pop_ref - Aggregated data for Life Years Lost estimation.
simu_data - Simulated population for Life Years Lost estimation.

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.30 score 2 stars 2 scripts 347 downloads 10 exports 34 dependencies

Last updated 1 years agofrom:aae6153627. Checks:OK: 2. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 06 2024
R-4.5-linux	OK	Nov 06 2024

Exports:lyl lyl_2plot lyl_aggregated lyl_aggregated_range lyl_checkplot lyl_ci lyl_compare_plot lyl_diff lyl_diff_ref lyl_range

Dependencies:cli cpp11 crayon dplyr evaluate fansi generics glue highr hms knitr lattice lifecycle magrittr Matrix pillar pkgconfig pracma prettyunits progress purrr R6 rlang stringi stringr survival tibble tidyr tidyselect utf8 vctrs withr xfun yaml

Help page	Topics
Simulated aggregated data for Life Years Lost estimation.	aggreg_data
Life Years Lost at one specific age.	lyl
Plot Life Years Lost at one specific age for two different populations	lyl_2plot
Life Years Lost at one specific age using aggregated data.	lyl_aggregated
Life Years Lost at a range of different ages using aggregated data.	lyl_aggregated_range
Plot number of persons at risk at each specific age.	lyl_checkplot
Confidence intervals for Life Years Lost.	lyl_ci
Plot Life Years Lost at one specific age for two or more different populations	lyl_compare_plot
Summarize differences in Life Years Lost.	lyl_diff
Summarize differences in Life Years Lost.	lyl_diff_ref
Life Years Lost at a range of different ages.	lyl_range
Plot Life Years Lost at one specific age	plot.lyl
Plot Life Years Lost at one specific age for two different populations obtained from aggregated data	plot.lyl_aggregated
Plot evolution of bootstrapped parameters for Life Years Lost	plot.lyl_ci
Plot Life Years Lost at a range of different ages	plot.lyl_range
Aggregated data for Life Years Lost estimation.	pop_ref
Simulated population for Life Years Lost estimation.	simu_data
Summarize Life Years Lost at one specific age	summary.lyl
Summarize Life Years Lost at one specific age	summary.lyl_aggregated
Summarize Life Years Lost with confidence intervals	summary.lyl_ci
Summarize Life Years Lost over a range of differents ages	summary.lyl_range

Package: lillies 0.2.12

lillies: Estimation of Life Years Lost

Citation

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)