Package: jstable 1.3.5

Jinseob Kim

jstable: Create Tables from Different Types of Regression

Create regression tables from generalized linear model(GLM), generalized estimating equation(GEE), generalized linear mixed-effects model(GLMM), Cox proportional hazards model, survey-weighted generalized linear model(svyglm) and survey-weighted Cox model results for publication.

Authors:Jinseob Kim [aut, cre], Zarathu [cph, fnd], Yoonkyoung Jeon [aut], Jaehun Shon [aut], Hyojong Myung [aut]

jstable_1.3.5.tar.gz
jstable_1.3.5.tar.gz(r-4.5-noble)jstable_1.3.5.tar.gz(r-4.4-noble)
jstable_1.3.5.tgz(r-4.4-emscripten)jstable_1.3.5.tgz(r-4.3-emscripten)
jstable.pdf |jstable.html✨
jstable/json (API)
NEWS

# Install 'jstable' in R:

install.packages('jstable', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jinseob2kim/jstable/issues

Datasets:

mort - DATASET_TITLE

6.16 score 2 stars 1 packages 194 scripts 1.9k downloads 32 exports 64 dependencies

Last updated 3 days agofrom:dd780a33cb. Checks:OK: 2. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Oct 21 2024
R-4.5-linux	OK	Oct 21 2024

Exports:coefNA cox2.display coxme.display CreateTableOne2 CreateTableOneJS geeExp geeglm.display geeUni glmshow.display LabelepiDisplay LabeljsCox LabeljsGeeglm LabeljsMetric LabeljsMixed LabeljsRanef LabeljsTable lmer.display mk.lev mk.lev.var opt.data opt.roc opt.simpledown opt.tb1 opt.tbreg svycox.display svyCreateTableOne2 svyCreateTableOneJS svyregress.display TableSubgroupCox TableSubgroupGLM TableSubgroupMultiCox TableSubgroupMultiGLM

Dependencies:backports bdsmatrix bit bit64 boot broom class cli clipr coxme cpp11 crayon data.table DBI dplyr e1071 fansi forcats gdata geepack generics glue gmodels gtools haven hms labelled lattice lifecycle lme4 magrittr MASS Matrix minqa mitools nlme nloptr numDeriv pillar pkgconfig prettyunits progress proxy purrr R6 Rcpp RcppArmadillo RcppEigen readr rlang stringi stringr survey survival tableone tibble tidyr tidyselect tzdb utf8 vctrs vroom withr zoo

Introduce jstable

Jinseob Kim

Rendered fromjstable.Rmdusingknitr::rmarkdownon Oct 21 2024.

Last update: 2023-10-18
Started: 2019-02-01

Citation

Readme and manuals

Help Manual

Help page	Topics
coefNA: make coefficient table with NA	coefNA
cox2.display: table for coxph.object with model option: TRUE - allow "frailty" or "cluster" model	cox2.display
coxExp: transform the unit of coefficients in cox model(internal function)	coxExp
coxme.display: table for coxme.object (coxme package)	coxme.display
coxmeTable: Summary table of coxme.object(internal function)	coxmeTable
CreateTableOne2: Modified CreateTableOne function in tableone package	CreateTableOne2
CreateTableOneJS: Modified CreateTableOne function in tableone package	CreateTableOneJS
extractAIC.coxme: Extract AIC from coxme.object	extractAIC.coxme
geeExp: transform the unit of coefficients (internal function)	geeExp
geeglm.display	geeglm.display
geeUni: The coefficient of univariate gee (internal function)	geeUni
glmshow.display: Show summary table of glm object.	glmshow.display
LabelepiDisplay: Apply label information to epiDisplay object using label data	LabelepiDisplay
LabeljsCox: Apply label information to cox2.display object using label data	LabeljsCox
LabeljsGeeglm: Apply label information to geeglm.display object using label data	LabeljsGeeglm
LabeljsMetric: Apply label information to jstable metric object using label data	LabeljsMetric
LabeljsMixed: Apply label information to jstable object using label data	LabeljsMixed
LabeljsRanef: Apply label information to jstable random effect object using label data	LabeljsRanef
LabeljsTable: Apply label information to jstable object using label data	LabeljsTable
lmer.display: table for "lmerMod" or "glmerMod" object (lme4 package)	lmer.display
lmerExp: transform the unit of coefficients (internal function)	lmerExp
Export label and level: multiple variable	mk.lev
Export label and level: one variable	mk.lev.var
DATASET_TITLE	mort
datable option for data(DT package)	opt.data
datable option for ROC result(DT package)	opt.roc
datable option for simple download(DT package)	opt.simpledown
datable option for table 1(DT package)	opt.tb1
datable option for regression table(DT package)	opt.tbreg
svycoxph.display: table for svycoxph.object in survey package.	svycox.display
svyCreateTableOne2: Modified svyCreateTableOne function in tableone package	svyCreateTableOne2
svyCreateTableOneJS: Modified CreateTableOne function in tableone package	svyCreateTableOneJS
svyregress.display: table for svyglm.object	svyregress.display
TableSubgroupCox: Sub-group analysis table for Cox/svycox model.	TableSubgroupCox
TableSubgroupGLM: Sub-group analysis table for GLM.	TableSubgroupGLM
TableSubgroupMultiCox: Multiple sub-group analysis table for Cox/svycox model.	TableSubgroupMultiCox
TableSubgroupMultiGLM: Multiple sub-group analysis table for GLM.	TableSubgroupMultiGLM