Package: jamba 1.0.2
jamba: Just Analysis Methods Base
Just analysis methods ('jam') base functions focused on bioinformatics. Version- and gene-centric alphanumeric sort, unique name and version assignment, colorized console and 'HTML' output, color ramp and palette manipulation, 'Rmarkdown' cache import, styled 'Excel' worksheet import and export, interpolated raster output from smooth scatter and image plots, list to delimited vector, efficient list tools.
Authors:
jamba_1.0.2.tar.gz
jamba_1.0.2.tar.gz(r-4.5-noble)jamba_1.0.2.tar.gz(r-4.4-noble)
jamba_1.0.2.tgz(r-4.4-emscripten)jamba_1.0.2.tgz(r-4.3-emscripten)
jamba.pdf |jamba.html✨
jamba/json (API)
NEWS
# Install 'jamba' in R: |
install.packages('jamba', repos = 'https://cloud.r-project.org') |
Bug tracker:https://github.com/jmw86069/jamba/issues
Pkgdown site:https://jmw86069.github.io
Last updated 1 hours agofrom:48151963fb. Checks:3 OK. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Mar 10 2025 |
R-4.5-linux | OK | Mar 10 2025 |
R-4.4-linux | OK | Mar 10 2025 |
Exports:adjustAxisLabelMarginsalpha2colapplyCLrangeapplyXlsxCategoricalFormatapplyXlsxConditionalFormatasDateasSizebreakDensitybreaksByVectorcall_fn_ellipsiscell_fun_labelcheck_pkg_installedcheckLightModecol2alphacol2hclcol2hslcol2hsvcolNum2excelNamecolor_dithercolor2gradientcoordPresetscPastecPasteScPasteSUcPasteUcPasteUniquedateToDaysOlddecideMfrowdeg2raddrawLabelsexp2signedfillBlanksfixYellowfixYellowHueformatIntgetAxisLabelgetColorRampgetDategetPlotAspectgreplsgroupedAxisgsubOrderedgsubshandleArgsTexthcl2colheadsheatmap_column_orderheatmap_row_orderhsl2colhsv2coligrepigrepHasigreplimageByColorsimageDefaultisColorisFALSEVisTRUEVjam_rapplyjamCalcDensityjargskable_coloringlist2dflldflog2signedlogFoldAxismake_html_stylesmake_stylesmakeColorDarkermakeNamesmergeAllXYmiddleminorLogTicksminorLogTicksAxismixedOrdermixedSortmixedSortDFmixedSortsmmixedOrdernameVectornameVectorNnewestFilenoiseFloornormScalenullPlotpadIntegerpadStringpasteByRowpasteByRowOrderedplotPolygonDensityplotRidgesplotSmoothScatterprintDebugprintDebugHtmlprintDebugIproigrepprovigreppvalueAxisrad2degrainbow2rbindListreadOpenxlsxrelist_namedreload_rmarkdown_cacherenameColumnrgb2colrlengthsrmInfinitermNArmNAsrmNULLrowGroupMeansrowGroupRmOutliersrowRmMadOutlierssclasssdimsdimaset_xlsx_colwidthsset_xlsx_rowheightssetCLrangessetPromptsetTextContrastColorshadowTextshadowText_optionsshowColorssizeAsNumsmoothScatterJamsqrtAxisssdimssdimatcountucfirstunalphaunigrepuniquesunnestListunvigrepusrBoxvgrepvigrepwarpAroundZerowarpRampwriteOpenxlsx
Dependencies:colorspaceKernSmoothRColorBrewerwithr
Citation
Farris S, Ward JM, Carstens KE, Samadi M, Wang Y, Dudek SM (2019). “Hippocampal Subregions Express Distinct Dendritic Transcriptomes that Reveal Differences in Mitochondrial Function in CA2.” Cell Reports, 29(2), 522-539. doi:10.1016/j.celrep.2019.08.093.
Corresponding BibTeX entry:
@Article{, title = {Hippocampal Subregions Express Distinct Dendritic Transcriptomes that Reveal Differences in Mitochondrial Function in CA2}, author = {Shannon Farris and James M. Ward and Kelly E. Carstens and Mahsa Samadi and Yu Wang and Serena M. Dudek}, year = {2019}, journal = {Cell Reports}, volume = {29}, number = {2}, pages = {522-539}, doi = {10.1016/j.celrep.2019.08.093}, }