Package: jacpop 0.6
Dmitry Prokopenko
jacpop: Jaccard Index for Population Structure Identification
Uses the Jaccard similarity index to account for population structure in sequencing studies. This method was specifically designed to detect population stratification based on rare variants, hence it will be especially useful in rare variant analysis.
Authors:
jacpop_0.6.tar.gz
jacpop_0.6.tar.gz(r-4.7-any)jacpop_0.6.tar.gz(r-4.6-any)
jacpop_0.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
jacpop/json (API)
NEWS
| # Install 'jacpop' in R: |
| install.packages('jacpop', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:5acd6f712b. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 98 | ||
| source / vignettes | OK | 117 | ||
| linux-release-x86_64 | OK | 100 | ||
| wasm-release | OK | 89 |
Exports:generate_pw_jaccard
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate pairwise Jaccard similarity matrix | generate_pw_jaccard |