Package: infinitefactor 1.0

Evan Poworoznek

infinitefactor: Bayesian Infinite Factor Models

Sampler and post-processing functions for semi-parametric Bayesian infinite factor models, motivated by the Multiplicative Gamma Shrinkage Prior of Bhattacharya and Dunson (2011) <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3419391/>. Contains component C++ functions for building samplers for linear and 2-way interaction factor models using the multiplicative gamma and Dirichlet-Laplace shrinkage priors. The package also contains post processing functions to return matrices that display rotational ambiguity to identifiability through successive application of orthogonalization procedures and resolution of column label and sign switching. This package was developed with the support of the National Institute of Environmental Health Sciences grant 1R01ES028804-01.

Authors:Evan Poworoznek

infinitefactor_1.0.tar.gz
infinitefactor_1.0.tar.gz(r-4.5-noble)infinitefactor_1.0.tar.gz(r-4.4-noble)
infinitefactor_1.0.tgz(r-4.4-emscripten)infinitefactor_1.0.tgz(r-4.3-emscripten)
infinitefactor.pdf |infinitefactor.html
infinitefactor/json (API)

# Install 'infinitefactor' in R:
install.packages('infinitefactor', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblascppopenmp

1.70 score 7 scripts 128 downloads 29 exports 34 dependencies

Last updated 5 years agofrom:f33f4f2ff3. Checks:OK: 1 NOTE: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 26 2024
R-4.5-linux-x86_64NOTENov 26 2024

Exports:ameanaplrdel_mgeta_inteta_lininteractionDLinteractionMGSPjointRotlam_linlinearDLlinearMGSPlmeanmhmsfmsfOUTphi_dlphi_intplm_dlplm_mgplotmatpsi_dlpsi_intpsi_mgrgigrigsig_linssy_intsummattau_dl

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppRcppArmadilloreshape2rlangscalesstringistringrtibbleutf8vctrsviridisLitewithr