Package: ijtiff 3.1.0
Rory Nolan
ijtiff: Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
General purpose TIFF file I/O for R users. Currently the only such package with read and write support for TIFF files with floating point (real-numbered) pixels, and the only package that can correctly import TIFF files that were saved from 'ImageJ' and write TIFF files than can be correctly read by 'ImageJ' <https://imagej.net/ij/>. Also supports text image I/O.
Authors:
ijtiff_3.1.0.tar.gz
ijtiff_3.1.0.tar.gz(r-4.5-noble)ijtiff_3.1.0.tar.gz(r-4.4-noble)
ijtiff_3.1.0.tgz(r-4.4-emscripten)ijtiff_3.1.0.tgz(r-4.3-emscripten)
ijtiff.pdf |ijtiff.html✨
ijtiff/json (API)
NEWS
| # Install 'ijtiff' in R: |
| install.packages('ijtiff', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ropensci/ijtiff/issues
Pkgdown site:https://docs.ropensci.org
Last updated 4 days agofrom:13abbd05b0. Checks:3 OK. Indexed: no.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 10 2025 |
| R-4.5-linux-x86_64 | OK | Mar 10 2025 |
| R-4.4-linux-x86_64 | OK | Mar 10 2025 |
Exports:as_EBImageas_ijtiff_imgas.rastercount_framesdisplayframes_countget_supported_tagsijtiff_imglinescan_to_stackread_tagsread_tifread_txt_imgstack_to_linescantags_readtif_readtif_tags_referencetif_writetxt_img_readtxt_img_writewrite_tifwrite_txt_img
Dependencies:backportsbitbit64checkmateclicliprcpp11crayondplyrfansifsgenericsgluehmsjsonlitelifecyclelubridatemagrittrpillarpkgconfigprettyunitsprogresspurrrR6readrrlangstrexstringistringrtibbletidyselecttimechangetzdbutf8vctrsvroomwithr
Reading and Writing Images
Rendered fromreading-and-writing-images.Rmdusingknitr::rmarkdownon Mar 10 2025.Last update: 2025-03-10
Started: 2018-09-10
Text Images
Rendered fromtext-images.Rmdusingknitr::rmarkdownon Mar 10 2025.Last update: 2018-09-10
Started: 2018-09-10
The ImageJ Problem
Rendered fromthe-imagej-problem.Rmdusingknitr::rmarkdownon Mar 10 2025.Last update: 2025-03-10
Started: 2018-09-10
Working with TIFF Tags
Rendered fromtiff-tags.Rmdusingknitr::rmarkdownon Mar 10 2025.Last update: 2025-03-10
Started: 2025-03-10
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Convert an ijtiff_img to an EBImage::Image. | as_EBImage |
| Convert an ijtiff_img object to a raster object for plotting | as.raster.ijtiff_img |
| Count the number of frames in a TIFF file. | count_frames frames_count |
| Basic image display. | display |
| Get supported TIFF tags | get_supported_tags |
| 'ijtiff': TIFF I/O for _ImageJ_ users | ijtiff-package ijtiff |
| 'ijtiff_img' class. | as_ijtiff_img ijtiff_img |
| Rejig linescan images. | linescan-conversion linescan_to_stack stack_to_linescan |
| Print method for an 'ijtiff_img'. | print.ijtiff_img |
| Read TIFF tag information without actually reading the image array. | read_tags tags_read |
| Read an image stored in the TIFF format | read_tif tif_read |
| Read/write an image array to/from disk as text file(s). | read_txt_img text-image-io txt_img_read txt_img_write write_txt_img |
| TIFF tag reference. | tif_tags_reference |
| Write images in TIFF format | tif_write write_tif |
