Package: idar 1.5
Marcelino de la Cruz
idar: Individual Diversity-Area Relationships
Computes and tests individual (species, phylogenetic and functional) diversity-area relationships, i.e., how species-, phylogenetic- and functional-diversity varies with spatial scale around the individuals of some species in a community. See applications of these methods in Wiegand et al. (2007) <doi:10.1073/pnas.0705621104> or Chacon-Labella et al. (2016) <doi:10.1007/s00442-016-3547-z>.
Authors:
idar_1.5.tar.gz
idar_1.5.tar.gz(r-4.5-noble)idar_1.5.tar.gz(r-4.4-noble)
idar_1.5.tgz(r-4.4-emscripten)idar_1.5.tgz(r-4.3-emscripten)
idar.pdf |idar.html✨
idar/json (API)
| # Install 'idar' in R: |
| install.packages('idar', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- SF - San Francisco forest plot.
- SFphylotree - San Francisco forest plot.
- SFtraits - San Francisco forest plot.
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:9eb164fb09. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-linux-x86_64 | OK | Oct 30 2024 |
Exports:checktraitschecktreecontroldisenvelope4idarifdaripscaripsearipsimipsimlistipsraripsvarisarLF.goflocaldarmidarmitablemultifocalsimulatorpisarplot.pidarproportion.idarrisarsimulador2
Dependencies:abindade4apeclusterdeldirdigestFDgeometrygoftestlatticelinproglpSolvemagicMASSMatrixmgcvnlmepermutepicantepixmappolyclipRcppRcppArmadilloRcppProgressrpartspspatstatspatstat.dataspatstat.explorespatstat.geomspatstat.linnetspatstat.modelspatstat.randomspatstat.sparsespatstat.univarspatstat.utilstensorvegan
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Check Trait and Phylo Data | checktraits checktree |
| Compute Simulation Envelopes for IDAR(r) Functions | envelope4idar idar2 raoDmod |
| Average Functional Dispersion | fdis |
| Simulate Multivariate Point Patterns | ipsim ipsimlist multifocalsimulator simulador2 |
| Individual Diversity Area Relationships | ifdar ipscar ipsear ipsrar ipsvar isar |
| Loosmore and Ford Goodness of Fit Test | LF.gof |
| Map Local Diversity Area Relationships | fdismap localdar raoDmap |
| Customize the Individual Diversity-Area Relationship Function | midar |
| Tabulate Marks in Neighbourhood of Every Point in a Point Pattern | mitable |
| Phylogenetic Individual Species Area Relationship | controldis pisar risar |
| Determine the Proportion of Accumulator and Repeller Species | plot.pidar proportion.idar |
| San Francisco forest plot. | SF SFphylotree SFtraits |