Package: historicalborrow 1.1.0

William Michael Landau

historicalborrow: Non-Longitudinal Bayesian Historical Borrowing Models

Historical borrowing in clinical trials can improve precision and operating characteristics. This package supports a hierarchical model and a mixture model to borrow historical control data from other studies to better characterize the control response of the current study. It also quantifies the amount of borrowing through benchmark models (independent and pooled). Some of the methods are discussed by Viele et al. (2013) <doi:10.1002/pst.1589>.

Authors:William Michael Landau [aut, cre], Albert Man [rev], Eli Lilly and Company [cph]

historicalborrow_1.1.0.tar.gz
historicalborrow_1.1.0.tar.gz(r-4.5-noble)historicalborrow_1.1.0.tar.gz(r-4.4-noble)
historicalborrow_1.1.0.tgz(r-4.4-emscripten)historicalborrow_1.1.0.tgz(r-4.3-emscripten)
historicalborrow.pdf |historicalborrow.html
historicalborrow/json (API)

# Install 'historicalborrow' in R:
install.packages('historicalborrow', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/wlandau/historicalborrow/issues

Pkgdown:https://wlandau.github.io

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3

jagscpp

3.00 score 548 downloads 18 exports 46 dependencies

Last updated 3 months agofrom:a5b2315d34. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 10 2024
R-4.5-linuxOKDec 10 2024

Exports:hb_convergencehb_datahb_esshb_mcmc_hierarchicalhb_mcmc_independenthb_mcmc_mixturehb_mcmc_mixture_hyperparametershb_mcmc_poolhb_metricshb_plot_borrowhb_plot_grouphb_plot_tauhb_s_tauhb_sim_hierarchicalhb_sim_independenthb_sim_mixturehb_sim_poolhb_summary

Dependencies:abindbackportscheckmateclicodacolorspacecpp11distributionaldplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmatrixStatsmgcvmunsellnlmenumDerivpillarpkgconfigposteriorpurrrR6RColorBrewerrjagsrlangscalesstringistringrtensorAtibbletidyrtidyselectutf8vctrsviridisLitewithr

Methods

Rendered frommethods.Rmdusingknitr::rmarkdownon Dec 10 2024.

Last update: 2024-09-11
Started: 2022-09-13

Usage

Rendered fromusage.Rmdusingknitr::rmarkdownon Dec 10 2024.

Last update: 2024-09-11
Started: 2022-09-13