Package: hbim 1.1.2
Michael P. Fay
hbim: Hill/Bliss Independence Model for Combination Vaccines
Calculate expected relative risk and proportion protected assuming normally distributed log10 transformed antibody dose for a several component vaccine. Uses Hill models for each component which are combined under Bliss independence. See Saul and Fay, 2007 <doi:10.1371/journal.pone.0000850>.
Authors:
hbim_1.1.2.tar.gz
hbim_1.1.2.tar.gz(r-4.5-noble)hbim_1.1.2.tar.gz(r-4.4-noble)
hbim_1.1.2.tgz(r-4.4-emscripten)hbim_1.1.2.tgz(r-4.3-emscripten)
hbim.pdf |hbim.html✨
hbim/json (API)
# Install 'hbim' in R: |
install.packages('hbim', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 1 years agofrom:9f0c312dc0. Checks:OK: 1 NOTE: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 16 2024 |
R-4.5-linux | NOTE | Dec 16 2024 |
Exports:calc.foldrangeeff.mueff.rhoeff.sigmaequiv.abequiv.increasehbpphbpp.integrate1hbpp.integrate2hbpp.integrate3hbpp.simulatehbrrhbrr.integrate1hbrr.integrate2hbrr.integrate2.rhoeq1hbrr.integrate3hbrr.integrate3.rhoeq1hbrr.simulatemake.vplotlogm.respplotresp.equivplotresp.mixpp.mupp.rhopp.sigma
Dependencies:mvtnorm
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Hill/Bliss Independence Model for Multicomponent Vaccines | hbim-package hbim |
Calculate stadard error and fold-range from confidence interval | calc.foldrange |
HBIM data | deff.mu deff.rho deff.sigma dpp.mu dpp.rho dpp.sigma |
Create data sets for plots | eff.mu eff.rho eff.sigma pp.mu pp.rho pp.sigma |
Equivalent antibody calculations by Linear Interpolation | equiv.ab |
Calculate equivalent increase from two dose-response curves | equiv.increase |
Calculate expected relative risk or percent protected from Hill model with Bliss Independence | hbpp hbrr |
Immune Response data | irdata |
Make Exchangeable Variance Matrix | make.v |
Plot Hill/Bliss Independence Model Data. | plotlogm.resp plotresp.equiv plotresp.mix |
Reference list | refs |