Package: haploR 4.0.7

Ilya Y. Zhbannikov

haploR: Query 'HaploReg', 'RegulomeDB'

A set of utilities for querying 'HaploReg' <https://pubs.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <https://www.regulomedb.org/regulome-search/> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.

Authors:Ilya Y. Zhbannikov [aut, cre], Konstantin G. Arbeev [aut], Anatoliy I. Yashin [aut]

haploR_4.0.7.tar.gz
haploR_4.0.7.tar.gz(r-4.5-noble)haploR_4.0.7.tar.gz(r-4.4-noble)
haploR_4.0.7.tgz(r-4.4-emscripten)haploR_4.0.7.tgz(r-4.3-emscripten)
haploR.pdf |haploR.html✨
haploR/json (API)
NEWS

# Install 'haploR' in R:
install.packages('haploR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.72 score 1 stars 35 scripts 880 downloads 3 mentions 7 exports 52 dependencies

Last updated 1 years agofrom:7670364348. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 02 2024
R-4.5-linuxOKDec 02 2024

Exports:as.numgetExtendedViewgetStudyListqueryHaploregqueryRegulomeregulomeSearchregulomeSummary

Dependencies:askpassbase64encbitopsbslibcachemclicrosstalkcurldigestDTevaluatefansifastmapfontawesomefsgluehighrhtmltoolshtmlwidgetshttpuvhttrjquerylibjsonliteknitrlaterlazyevallifecyclemagrittrmemoisemimeopensslpillarpkgconfigplyrpromisesR6rappdirsRcppRCurlRJSONIOrlangrmarkdownRUnitsasssystibbletinytexutf8vctrsxfunXMLyaml

Using haploR, an R package for querying HaploReg and RegulomeDB

Ilya Y. Zhbannikov

Rendered fromhaplor-vignette.Rmdusingknitr::rmarkdownon Dec 02 2024.

Last update: 2021-09-19
Started: 2016-12-31