Package: goldfish 1.6.10

Alvaro Uzaheta

goldfish: Statistical Network Models for Dynamic Network Data

Tools for fitting statistical network models to dynamic network data. Can be used for fitting both dynamic network actor models ('DyNAMs') and relational event models ('REMs'). Stadtfeld, Hollway, and Block (2017a) <doi:10.1177/0081175017709295>, Stadtfeld, Hollway, and Block (2017b) <doi:10.1177/0081175017733457>, Stadtfeld and Block (2017) <doi:10.15195/v4.a14>, Hoffman et al. (2020) <doi:10.1017/nws.2020.3>.

Authors:James Hollway [aut, dtc], Christoph Stadtfeld [aut, dtc], Marion Hoffman [aut], Alvaro Uzaheta [cre, aut], Mirko Reul [ctb], Timon Elmer [ctb], Kieran Mepham [ctb], Per Block [ctb], Xiaolei Zhang [ctb], Weigutian Ou [ctb], Emily Garvin [ctb], Siwei Zhang [ctb]

goldfish_1.6.10.tar.gz
goldfish_1.6.10.tar.gz(r-4.5-noble)goldfish_1.6.10.tar.gz(r-4.4-noble)
goldfish_1.6.10.tgz(r-4.4-emscripten)goldfish_1.6.10.tgz(r-4.3-emscripten)
goldfish.pdf |goldfish.html✨
goldfish/json (API)
NEWS

# Install 'goldfish' in R:
install.packages('goldfish', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/stocnet/goldfish/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library
Datasets:
  • actors - Social evolution of a university dormitory cohort
  • bilatchanges - International bilateral fisheries treaties
  • bilatnet - International bilateral fisheries treaties
  • calls - Social evolution of a university dormitory cohort
  • contigchanges - International bilateral fisheries treaties
  • contignet - International bilateral fisheries treaties
  • friendship - Social evolution of a university dormitory cohort
  • gdpchanges - International bilateral fisheries treaties
  • known.before - RFID Validity dataset
  • participants - RFID Validity dataset
  • regchanges - International bilateral fisheries treaties
  • rfid - RFID Validity dataset
  • sovchanges - International bilateral fisheries treaties
  • states - International bilateral fisheries treaties
  • video - RFID Validity dataset

4.25 score 44 scripts 398 downloads 12 exports 33 dependencies

Last updated 2 months agofrom:c9d6e0a135. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKOct 04 2024
R-4.5-linux-x86_64OKOct 04 2024

Exports:defineDependentEventsdefineGlobalAttributedefineGroups_interactiondefineNetworkdefineNodesestimateexamineChangepointsexamineOutliersGatherPreprocessingglancelinkEventstidy

Dependencies:changepointclicolorspacefansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcppRcppArmadillorlangscalestibbleutf8vctrsviridisLitewithrzoo

DyNAM-i: an example script

Marion Hoffman

Rendered fromdynami-example.Rmdusingknitr::rmarkdownon Oct 04 2024.

Last update: 2024-09-04
Started: 2022-08-24

DyNAM: How to start

Christoph Stadtfeld, James Hollway, Marion Hoffman, Alvaro Uzaheta, Kieran Mepham, Timon Elmer, Mirko Reul

Rendered fromteaching1.Rmdusingknitr::rmarkdownon Oct 04 2024.

Last update: 2024-09-04
Started: 2022-08-24

goldfish Effects

Alvaro Uzaheta and Siwei Zhang

Rendered fromgoldfishEffects.Rmdusingknitr::rmarkdownon Oct 04 2024.

Last update: 2024-04-12
Started: 2022-08-24

The Coordination Model and Extensions

James Hollway

Rendered fromteaching2.Rmdusingknitr::rmarkdownon Oct 04 2024.

Last update: 2024-09-04
Started: 2022-08-24

Readme and manuals

Help Manual

Help pageTopics
goldfish packagegoldfish-package goldfish
Define dependent events for a modeldefineDependentEvents
Define a global time-varying attributedefineGlobalAttribute
To define the second mode of a DyNAM-i modeldefineGroups_interaction
Defining a network with dynamic eventsdefineNetwork
Defining a node set with (dynamic) node attributes.defineNodes
Estimate a modelestimate
Diagnostic functionsexamine examineChangepoints examineOutliers
International bilateral fisheries treaties (1960-1970)bilatchanges bilatnet contigchanges contignet Fisheries_Treaties_6070 gdpchanges regchanges sovchanges states
Gather preprocess data from a formulaGatherPreprocessing
Link dynamic events to a nodeset or a networklinkEvents linkEvents.default linkEvents.network.goldfish linkEvents.nodes.goldfish
Extract log-likelihood from a fitted model objectlogLik.result.goldfish
Methods for 'goldfish' objects.print-method print.dependent.goldfish print.network.goldfish print.nodes.goldfish print.preprocessed.goldfish print.result.goldfish print.summary.result.goldfish
RFID Validity datasetknown.before participants rfid RFID_Validity_Study video
Social evolution of a university dormitory cohortactors calls friendship Social_Evolution
Methods to update a nodes or network objectas.data.frame.nodes.goldfish as.matrix.network.goldfish update-method