Package: gjam 2.6.2
gjam: Generalized Joint Attribute Modeling
Analyzes joint attribute data (e.g., species abundance) that are combinations of continuous and discrete data with Gibbs sampling. Full model and computation details are described in Clark et al. (2018) <doi:10.1002/ecm.1241>.
Authors:
gjam_2.6.2.tar.gz
gjam_2.6.2.tar.gz(r-4.5-noble)gjam_2.6.2.tar.gz(r-4.4-noble)
gjam_2.6.2.tgz(r-4.4-emscripten)gjam_2.6.2.tgz(r-4.3-emscripten)
gjam.pdf |gjam.html✨
gjam/json (API)
# Install 'gjam' in R: |
install.packages('gjam', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 3 years agofrom:296c89707a. Checks:OK: 1 NOTE: 1. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 16 2024 |
R-4.5-linux-x86_64 | NOTE | Dec 16 2024 |
Exports:gjamgjamCensorYgjamConditionalParametersgjamDeZerogjamFillMissingTimesgjamIIEgjamIIEplotgjamOrdinationgjamPlotgjamPoints2GridgjamPredictgjamPriorTemplategjamReZerogjamSensitivitygjamSimDatagjamSpec2TraitgjamTrimY
Dependencies:MASSRANNRcppRcppArmadillo
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Generalized Joint Attribute Modeling | gjam-package GJAM |
Gibbs sampler for gjam data | gjam print.gjam summary.gjam |
Censor gjam response data | gjamCensorY |
Parameters for gjam conditional prediction | gjamConditionalParameters |
Compress (de-zero) gjam data | gjamDeZero |
Fill out data for time series (state-space) gjam | gjamFillMissingTimes |
Indirect effects and interactions for gjam data | gjamIIE |
Plots indirect effects and interactions for gjam data | gjamIIEplot |
Ordinate gjam data | gjamOrdination |
Plot gjam analysis | gjamPlot |
Incidence point pattern to grid counts | gjamPoints2Grid |
Predict gjam data | gjamPredict |
Prior coefficients for gjam analysis | gjamPriorTemplate |
Expand (re-zero) gjam data | gjamReZero |
Sensitivity coefficients for gjam | gjamSensitivity |
Simulated data for gjam analysis | gjamSimData |
Ecological traits for gjam analysis | gjamSpec2Trait |
Trim gjam response data | gjamTrimY |