Package: ggmRSCU 0.1.0
Xunhuan Ding
ggmRSCU: Visualizing Multi-Species Relative Synonymous Codon Usage and Extensible Data Exploration
Facilitates efficient visualization of Relative Synonymous Codon Usage patterns across species. Based on analytical outputs from 'codonW', 'MEGA', and 'Phylosuite', it supports multi-species 'RSCU' comparisons and allows users to explore visual analysis of structurally similar datasets.
Authors:
ggmRSCU_0.1.0.tar.gz
ggmRSCU_0.1.0.tar.gz(r-4.7-any)ggmRSCU_0.1.0.tar.gz(r-4.6-any)
ggmRSCU_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
ggmRSCU/json (API)
| # Install 'ggmRSCU' in R: |
| install.packages('ggmRSCU', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- energy_data - Energy Production Projection Data
- financial_data - Monthly financial data
- genomic_data - Hominid Genomic Architecture Dataset
- hydrogen_data - Hydrogen production by technology and scenario
- rscu_data - Relative Synonymous Codon Usage (RSCU) Data
- scoring_data - Cell Scoring Data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:3f71f31769. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 132 | ||
| source / vignettes | OK | 168 | ||
| linux-release-x86_64 | OK | 132 | ||
| wasm-release | OK | 123 |
Exports:ggmRSCUread_codonwread_megaread_phy
Dependencies:clicpp11data.tabledplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpatchworkpillarpkgconfigpurrrR6RColorBrewerrlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Energy Production Projection Data | energy_data |
| Monthly financial data (income and expenses breakdown) | financial_data |
| Hominid Genomic Architecture Dataset | genomic_data |
| Visualization of RSCU (Relative Synonymous Codon Usage) with ggplot2 | ggmRSCU |
| Hydrogen production by technology and scenario (2010–2070) | hydrogen_data |
| Process .blk files from CodonW | read_codonw |
| Process MEGA CSV Files | read_mega |
| Process PhyloSuite RSCU Data for Visualization | read_phy |
| Relative Synonymous Codon Usage (RSCU) Data | rscu_data |
| Cell Scoring Data | scoring_data |