Package: ggenealogy 1.0.3

Lindsay Rutter

ggenealogy: Visualization Tools for Genealogical Data

Methods for searching through genealogical data and displaying the results. Plotting algorithms assist with data exploration and publication-quality image generation. Includes interactive genealogy visualization tools. Provides parsing and calculation methods for variables in descendant branches of interest. Uses the Grammar of Graphics.

Authors:Lindsay Rutter, Susan Vanderplas, Di Cook

ggenealogy_1.0.3.tar.gz
ggenealogy_1.0.3.tar.gz(r-4.5-noble)ggenealogy_1.0.3.tar.gz(r-4.4-noble)
ggenealogy_1.0.3.tgz(r-4.4-emscripten)ggenealogy_1.0.3.tgz(r-4.3-emscripten)
ggenealogy.pdf |ggenealogy.html✨
ggenealogy/json (API)
NEWS

# Install 'ggenealogy' in R:

install.packages('ggenealogy', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

sbGeneal - Soybean data
statGeneal - Academic statistics data

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

24 exports 2 stars 0.36 score 73 dependencies 53 scripts 314 downloads

Last updated 7 months agofrom:5d340d5320. Checks:OK: 1 NOTE: 1. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Aug 20 2024
R-4.5-linux	NOTE	Aug 20 2024

Exports:buildAncDesTotalDF buildAncList buildDesList dfToIG getAncestors getBasicStatistics getBranchQual getBranchQuant getChild getDegree getDescendants getEdges getNodes getParent getPath getPathOnly getVariable isChild isParent plotAncDes plotDegMatrix plotPath plotPathOnAll plotVariableMatrix

Dependencies:askpass base64enc bslib cachem cli colorspace cpp11 crosstalk curl data.table digest dplyr evaluate fansi farver fastmap fontawesome fs generics ggplot2 glue gtable highr htmltools htmlwidgets httr igraph isoband jquerylib jsonlite knitr labeling later lattice lazyeval lifecycle magrittr MASS Matrix memoise mgcv mime munsell nlme openssl pillar pkgconfig plotly plyr promises purrr R6 rappdirs RColorBrewer Rcpp reshape2 rlang rmarkdown sass scales stringi stringr sys tibble tidyr tidyselect tinytex utf8 vctrs viridisLite withr xfun yaml

ggenealogy: Visualization tools for genealogical data

Rendered fromggenealogy.Rnwusingutils::Sweaveon Aug 20 2024.

Last update: 2024-02-22
Started: 2015-03-02

Citation

Readme and manuals

Help Manual

Help page	Topics
Returns the coordinate positions of all ancestors and descendants of a variety.	buildAncDesCoordDF
Returns data frame with plot coordinates of all ancestors and descendants of a variety.	buildAncDesTotalDF
Returns the ancestors of a particular variety (if they exist).	buildAncList
Returns the descendants of a particular variety (if they exist).	buildDesList
Build the edges in the genealogy graph.	buildEdgeTotalDF
Process the genealogy graph	buildMinusPathDF
Build data frame for path representation	buildPathDF
Build all labels in the graph	buildPlotTotalDF
Build a data frame where the varieties are spread so they do not overlap	buildSpreadTotalDF
Process the genealogy graph	dfToIG
Returns a list of the ancestors of a particular variety (if they exist)	getAncestors
Determine basic statistics of the graph object	getBasicStatistics
Descendant branch calculations for quantitative variable	getBranchQual
Descendant branch calculations for quantitative variable	getBranchQuant
Returns the children of a particular variety (if they exist)	getChild
Determine the degree between two varieties	getDegree
Returns a list of the descendants of a particular variety (if they exist)	getDescendants
Returns edges (vertex names and edge weights) for the full genealogy	getEdges
Returns the nodes for a full genealogy	getNodes
Returns the parents of a particular variety (if they exist)	getParent
Determine the path between two varieties	getPath
Determine the path between two varieties	getPathOnly
Determine the date of a variety	getVariable
Determine if a variety is a child of another	isChild
Determine if a variety is a parent of another	isParent
Returns the data frame representation of all ancestors and descendants of a variety	nodeToDF
Returns the image object to show the ancestors and descendants of a variety	plotAncDes
Returns the image object to show the heat map of degrees between the inputted set of vertices	plotDegMatrix
Construct the graphic object of the path	plotPath
Plot a path between two vertices over the full genealogy	plotPathOnAll
Returns the image object to show the heat map of dates between the inputted set of vertices	plotVariableMatrix
Soybean data	sbGeneal
Academic statistics data	statGeneal