Package: genie 1.0.5

Marek Gagolewski

genie: Fast, Robust, and Outlier Resistant Hierarchical Clustering

Includes the reference implementation of Genie - a hierarchical clustering algorithm that links two point groups in such a way that an inequity measure (namely, the Gini index) of the cluster sizes does not significantly increase above a given threshold. This method most often outperforms many other data segmentation approaches in terms of clustering quality as tested on a wide range of benchmark datasets. At the same time, Genie retains the high speed of the single linkage approach, therefore it is also suitable for analysing larger data sets. For more details see (Gagolewski et al. 2016 <doi:10.1016/j.ins.2016.05.003>). For an even faster and more feature-rich implementation, including, amongst others, noise point detection, see the 'genieclust' package.

Authors:Marek Gagolewski [aut, cre, cph], Maciej Bartoszuk [aut], Anna Cena [aut]

genie_1.0.5.tar.gz
genie_1.0.5.tar.gz(r-4.5-noble)genie_1.0.5.tar.gz(r-4.4-noble)
genie_1.0.5.tgz(r-4.4-emscripten)genie_1.0.5.tgz(r-4.3-emscripten)
genie.pdf |genie.html
genie/json (API)
NEWS

# Install 'genie' in R:
install.packages('genie', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/gagolews/genie/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

cppopenmp

1.20 score 16 scripts 241 downloads 1 exports 2 dependencies

Last updated 4 years agofrom:b18ba7c570. Checks:OK: 1 NOTE: 1. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 21 2024
R-4.5-linux-x86_64NOTEDec 21 2024

Exports:hclust2

Dependencies:genieclustRcpp