Package: gdm 1.6.0-5

Matt Fitzpatrick

gdm: Generalized Dissimilarity Modeling

A toolkit with functions to fit, plot, summarize, and apply Generalized Dissimilarity Models. Mokany K, Ware C, Woolley SNC, Ferrier S, Fitzpatrick MC (2022) <doi:10.1111/geb.13459> Ferrier S, Manion G, Elith J, Richardson K (2007) <doi:10.1111/j.1472-4642.2007.00341.x>.

Authors:Matt Fitzpatrick [aut, cre], Karel Mokany [aut], Glenn Manion [aut], Diego Nieto-Lugilde [aut], Simon Ferrier [aut], Roozbeh Valavi [ctb], Matthew Lisk [ctb], Chris Ware [ctb], Skip Woolley [ctb], Tom Harwood [ctb]

gdm_1.6.0-5.tar.gz
gdm_1.6.0-5.tar.gz(r-4.5-noble)gdm_1.6.0-5.tar.gz(r-4.4-noble)
gdm_1.6.0-5.tgz(r-4.4-emscripten)gdm_1.6.0-5.tgz(r-4.3-emscripten)
gdm.pdf |gdm.html✨
gdm/json (API)
NEWS

# Install 'gdm' in R:
install.packages('gdm', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/fitzlab-al/gdm/issues

Pkgdown site:https://mfitzpatrick.al.umces.edu

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • gdmDissim - An example biological dissimilarity matrix
  • southwest - Species and Environmental Data from Southwestern Australia.

cpp

4.63 score 1 stars 169 scripts 819 downloads 16 mentions 10 exports 24 dependencies

Last updated 5 days agofrom:ee003366b6. Checks:2 OK. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKJan 10 2025
R-4.5-linux-x86_64OKJan 10 2025

Exports:calculate.gdm.devianceformatsitepairgdmgdm.crossvalidationgdm.partition.deviancegdm.transformgdm.varImpisplineExtractplotUncertaintysubsample.sitepair

Dependencies:cliclustercodetoolsdoParallelforeachglueiteratorslatticelifecyclemagrittrMASSMatrixmgcvnlmepbapplypermuteplyrRcppreshape2rlangstringistringrvctrsvegan