Package: gcxgclab 1.0.1

Stephanie Gamble

gcxgclab: GCxGC Preprocessing and Analysis

Provides complete detailed preprocessing of two-dimensional gas chromatogram (GCxGC) samples. Baseline correction, smoothing, peak detection, and peak alignment. Also provided are some analysis functions, such as finding extracted ion chromatograms, finding mass spectral data, targeted analysis, and nontargeted analysis with either the 'National Institute of Standards and Technology Mass Spectral Library' or with the mass data. There are also several visualization methods provided for each step of the preprocessing and analysis.

Authors:Stephanie Gamble [aut, cre], Mannion Joseph [ctb], Granger Caroline [ctb], Battelle Savannah River Alliance [cph], NNSA, US DOE [fnd]

gcxgclab_1.0.1.tar.gz
gcxgclab_1.0.1.tar.gz(r-4.5-noble)gcxgclab_1.0.1.tar.gz(r-4.4-noble)
gcxgclab_1.0.1.tgz(r-4.4-emscripten)gcxgclab_1.0.1.tgz(r-4.3-emscripten)
gcxgclab.pdf |gcxgclab.html
gcxgclab/json (API)

# Install 'gcxgclab' in R:
install.packages('gcxgclab', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.00 score 1 scripts 155 downloads 32 exports 48 dependencies

Last updated 1 years agofrom:e4ad5d36c8. Checks:2 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 16 2025
R-4.5-linuxOKFeb 16 2025

Exports:alignbatch_eicbatch_msbatch_preprocessbl_corrcomp_nistcomp_peaksextract_datafind_eicfind_msgaussgauss_fitgauss2gauss2_fitmass_listnist_listnon_targetedphase_shiftplot_chrplot_defectplot_eicplot_gaussplot_gauss2plot_msplot_nistplot_peakplot_peakonlypreprocesssmoothtargetedthr_peakstop_peaks

Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelhslifecyclemagrittrMASSMatrixmgcvminpack.lmmunsellncdf4nildenlmenls.multstartpillarpkgconfigptwpurrrR6rbibutilsRColorBrewerRcppRcppArmadilloRcppDERdpackrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithrzoo

gcxgclab: GCxGC Preprocessing and Analysis

Rendered fromgcxgclab_vignette.Rmdusingknitr::rmarkdownon Feb 16 2025.

Last update: 2024-01-23
Started: 2024-01-23