Package: fibr 0.1.1

Aidan D Bindoff

fibr: Prior-Fraction Diagnostics for Hierarchical Models

Computes the prior fraction, the per-group pooling or shrinkage factor, for hierarchical models, including directly from 'brms' fits. For each group-level coefficient the prior fraction is the share of the posterior precision contributed by the shrinkage prior relative to the likelihood; values near one indicate a coefficient that is prior-dominated (the centring/non-centring funnel regime), values near zero indicate a likelihood-dominated coefficient that is well identified from the data. These quantities are invisible to standard convergence diagnostics such as R-hat and effective sample size, and they indicate where a non-centred reparameterisation is likely to help. A companion advisor reports the same decomposition for changepoint random effects fitted with 'smoothbp'. The underlying geometry (the Fisher-metric connection on the base-fiber split, for which this connection is flat so the obstruction is statistical rather than geometric) is described in Bindoff (2026) <doi:10.5281/zenodo.20724550>; code reproducing the paper is in the package's source repository.

Authors:Aidan D Bindoff [aut, cre]

fibr_0.1.1.tar.gz
fibr_0.1.1.tar.gz(r-4.7-any)fibr_0.1.1.tar.gz(r-4.6-any)
fibr_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
fibr/json (API)

# Install 'fibr' in R:
install.packages('fibr', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/abindoff/fibr/issues

On CRAN:

Conda:

1.70 score 1 scripts 2 exports 31 dependencies

Last updated from:83c8634cd6. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK239
source / vignettesOK359
linux-release-x86_64OK265
wasm-releaseOK296

Exports:prior_fractionsmoothbp_advisor

Dependencies:abindbackportscheckmateclicpp11distributionalfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrmatrixStatsnumDerivpillarpkgconfigposteriorR6RColorBrewerrlangS7scalestensorAtibbleutf8vctrsviridisLitewithr