Package: exeval 0.0.1
Martin Umpierrez
exeval: External Evaluation of Population Pharmacokinetic-Pharmacodynamic (popPKPD) Models
Provides tools to automate external pharmacokinetic model evaluation workflows, including Bayesian forecasting, predictive performance metrics, diagnostic plotting, and automated reporting.
Authors:
exeval_0.0.1.tar.gz
exeval_0.0.1.tar.gz(r-4.7-any)exeval_0.0.1.tar.gz(r-4.6-any)
exeval_0.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
exeval/json (API)
NEWS
| # Install 'exeval' in R: |
| install.packages('exeval', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/martin-umpierrez/exeval/issues
- exeval_models - Built-in population PK/PKPD models
- tacrolimus_pk1_kidney - Tacrolimus pharmacokinetic data in kidney transplant patients
Last updated from:16216f610d. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 170 | ||
| source / vignettes | OK | 204 | ||
| linux-release-x86_64 | OK | 182 | ||
| wasm-release | OK | 142 |
Exports:combine_metric_plotcombine_metricsexeval_ppkmetrics_occprepare_datarun_MAP_estimationsrun_pk_simulationsupdate_map_models
Dependencies:abindbackportsBHbootbroomcarcarDataclicolorspacecorrplotcowplotcpp11crayonDerivdoBydplyrfarverforecastFormulafracdiffgenericsggplot2ggpubrggrepelggsciggsignifgluegridExtragtablehmsisobandlabelinglatticelifecyclelme4lmtestmagrittrmapbayrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrmrgsolvenlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpolynomprettyunitsprogresspurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasrlangrstatixS7scalesSparseMstringistringrsurvivaltibbletidyrtidyselecttimeDateurcautf8vctrsviridisLitewithrzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Plot combined model performance metrics | combine_metric_plot |
| Combine evaluation metrics across multiple models | combine_metrics |
| Built-in population PK/PKPD models | exeval_models |
| External evaluation workflow for population PK, PKPD models | exeval_ppk plot.EvalPPK print.EvalPPK print.summary.EvalPPK summary.EvalPPK |
| Compute external evaluation performance metrics | metrics_occ |
| Prepare input data for exeval | prepare_data |
| Run MAP Bayesian Estimation for External Model Evaluation | run_MAP_estimations |
| Run PK simulations for external model evaluation | run_pk_simulations |
| Tacrolimus pharmacokinetic data in kidney transplant patients | tacrolimus_pk1_kidney |
| Update MAP estimation objects with posterior individual parameters | update_map_models |