Package: eSIR 0.4.2

Michael Kleinsasser

eSIR: Extended State-Space SIR Models

An implementation of extended state-space SIR models developed by Song Lab at UM school of Public Health. There are several functions available by 1) including a time-varying transmission modifier, 2) adding a time-dependent quarantine compartment, 3) adding a time-dependent antibody-immunization compartment. Wang L. (2020) <doi:10.6339/JDS.202007_18(3).0003>.

Authors:Lili Wang [aut], Song Lab [aut], Paul Egeler [ctb], Michael Kleinsasser [cre]

eSIR_0.4.2.tar.gz
eSIR_0.4.2.tar.gz(r-4.7-any)eSIR_0.4.2.tar.gz(r-4.6-any)
eSIR_0.4.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
eSIR/json (API)

# Install 'eSIR' in R:
install.packages('eSIR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

jagscpp

2.59 score 1 stars 39 scripts 277 downloads 2 mentions 4 exports 29 dependencies

Last updated from:70569d0ba3. Checks:2 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE122
source / vignettesOK547
linux-release-x86_64NOTE180
wasm-releaseOK103

Exports:eSAIRqh.eSIRtvt.eSIRtvt.eSIR2

Dependencies:chronclicodacpp11data.tablefarverggplot2gluegtablegtoolsisobandlabelinglatticelifecyclemagrittrplyrR6RColorBrewerRcppreshape2rjagsrlangS7scalesstringistringrvctrsviridisLitewithr