Package: eSIR 0.4.2

Michael Kleinsasser

eSIR: Extended State-Space SIR Models

An implementation of extended state-space SIR models developed by Song Lab at UM school of Public Health. There are several functions available by 1) including a time-varying transmission modifier, 2) adding a time-dependent quarantine compartment, 3) adding a time-dependent antibody-immunization compartment. Wang L. (2020) <doi:10.6339/JDS.202007_18(3).0003>.

Authors:Lili Wang [aut], Song Lab [aut], Paul Egeler [ctb], Michael Kleinsasser [cre]

eSIR_0.4.2.tar.gz
eSIR_0.4.2.tar.gz(r-4.5-noble)eSIR_0.4.2.tar.gz(r-4.4-noble)
eSIR_0.4.2.tgz(r-4.4-emscripten)eSIR_0.4.2.tgz(r-4.3-emscripten)
eSIR.pdf |eSIR.html✨
eSIR/json (API)

# Install 'eSIR' in R:
install.packages('eSIR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3
Datasets:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

4 exports 1 stars 0.71 score 38 dependencies 2 mentions 34 scripts 290 downloads

Last updated 3 years agofrom:70569d0ba3. Checks:OK: 1 NOTE: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 08 2024
R-4.5-linuxNOTESep 08 2024

Exports:eSAIRqh.eSIRtvt.eSIRtvt.eSIR2

Dependencies:chronclicodacolorspacedata.tablefansifarverggplot2gluegtablegtoolsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppreshape2rjagsrlangscalesstringistringrtibbleutf8vctrsviridisLitewithr