| Adjustment of the center and orientation of a latent configuration. | adjust_x |
| List of binary dissimilarity matrices among 18 animals. | animals |
| Bayesian multidimensional scaling (BMDS) using Markov Chain Monte Carlo (MCMC). | bmds |
| Posterior mode latent configuration in Bayesian multidimensional scaling (BMDS). | bmds_get_x_mode |
| Auxiliary function to recursively check NAs in a list. | check_list_na |
| Extract the final cluster memberships from a 'dmbc_config' class instance. | clusters,dmbc_config-method dmbc_config-clusters |
| Sum of squared residuals (SSR) from the observed distances and the given latent configuration. | comp_ssr |
| Estimation of a DMBC model. | dmbc |
| Auxiliary function for checking the grouping results of a fitted DMBC model. | dmbc_check_groups |
| An S4 class to represent the latent configuration estimate for a DMBC model. | dmbc_config dmbc_config-class |
| Auxiliary Function for Controlling DMBC Model Fitting | check_control control_dmbc dmbc_control |
| An S4 class to represent the data to use in a DMBC model. | dmbc_data dmbc_data-class |
| Fitter function for DMBC models. | dmbc_fit |
| Conversion of an 'dmbc_fit_list' object to a 'list'. | dmbc_fit_list_to_list |
| Conversion of an 'dmbc_fit_list' object to an object of class 'mcmc.list'. | dmbc_fit_list_to_mcmc.list |
| An S4 class to represent the results of fitting DMBC model. | dmbc_fit_list dmbc_fit_list-class |
| Conversion of an 'dmbc_fit' object to an object of class 'mcmc'. | dmbc_fit_to_mcmc |
| An S4 class to represent the results of fitting DMBC model. | dmbc_fit-class |
| Extractor function for a fitted DMBC model. | dmbc_get_configuration |
| Extractor function for a fitted DMBC model. | dmbc_get_map |
| Extractor function for a fitted DMBC model. | dmbc_get_ml |
| Extractor function for a fitted DMBC model. | dmbc_get_postmean |
| Extractor function for a fitted DMBC model. | dmbc_get_postmedian |
| Model selection of DMBC models. | dmbc_IC |
| An S4 class to represent the comparison of a set of DMBC models. | dmbc_ic dmbc_ic-class |
| Function to compute the starting values before fitting a DMBC models. | dmbc_init |
| Log-likelihood for DMBC models. | dmbc_logLik |
| Log-likelihood for DMBC models. | dmbc_logLik_rbmds |
| Auxiliary function for realigning the grouping of a fitted DMBC model. | dmbc_match_groups |
| An S4 class to represent a DMBC model. | dmbc_model dmbc_model-class |
| Auxiliary Function for Setting DMBC Model Priors | check_prior dmbc_prior prior_dmbc update_prior |
| Create an instance of the 'dmbc_config' class using new/initialize. | dmbc_config-initialize initialize,dmbc_config-method |
| Create an instance of the 'dmbc_data' class using new/initialize. | dmbc_data-initialize initialize,dmbc_data-method |
| Create an instance of the 'dmbc_fit_list' class using new/initialize. | dmbc_fit_list-initialize initialize,dmbc_fit_list-method |
| Create an instance of the 'dmbc_fit' class using new/initialize. | dmbc_fit-initialize initialize,dmbc_fit-method |
| Create an instance of the 'dmbc_ic' class using new/initialize. | dmbc_ic-initialize initialize,dmbc_ic-method |
| Create an instance of the 'dmbc_model' class using new/initialize. | dmbc_model-initialize initialize,dmbc_model-method |
| List of binary dissimilarity matrices among 15 kinship terms. | kinship |
| Information criterion for Bayesian multidimensional scaling (BMDS). | mdsic |
| Provide a graphical summary of a 'dmbc_config' class instance. | dmbc_config-plot plot,dmbc_config,ANY-method plot,dmbc_config-method |
| Provide a graphical summary of a 'dmbc_data' class instance. | dmbc_data-plot plot,dmbc_data,ANY-method plot,dmbc_data-method |
| Provide a graphical summary of a 'dmbc_fit_list' class instance. | dmbc_fit_list-plot plot,dmbc_fit_list,ANY-method plot,dmbc_fit_list-method |
| Provide a graphical summary of a 'dmbc_fit' class instance. | dmbc_fit-plot plot,dmbc_fit,ANY-method plot,dmbc_fit-method |
| Provide a graphical summary of a 'dmbc_ic' class instance. | dmbc_ic-plot plot,dmbc_ic,ANY-method plot,dmbc_ic-method |
| Show an instance of the 'dmbc_config' class. | dmbc_config-show show,dmbc_config-method |
| Show an instance of the 'dmbc_data' class. | dmbc_data-show show,dmbc_data-method |
| Show an instance of the 'dmbc_fit_list' class. | dmbc_fit_list-show show,dmbc_fit_list-method |
| Show an instance of the 'dmbc_fit' class. | dmbc_fit-show show,dmbc_fit-method |
| Show an instance of the 'dmbc_ic' class. | dmbc_ic-show show,dmbc_ic-method |
| Show an instance of the 'dmbc_model' class. | dmbc_model-show show,dmbc_model-method |
| Simulated binary dissimilarity matrices. | simdiss |
| Subsetting a 'dmbc_fit_list' object. | dmbc_fit_list-subset subset,dmbc_fit_list-method |
| Subsetting a 'dmbc_fit' object. | dmbc_fit-subset subset,dmbc_fit-method |
| Provide a summary of a 'dmbc_config' class instance. | dmbc_config-summary summary,dmbc_config-method |
| Provide a summary of a 'dmbc_data' class instance. | dmbc_data-summary summary,dmbc_data-method |
| Provide a summary of a 'dmbc_fit_list' class instance. | dmbc_fit_list-summary summary,dmbc_fit_list-method |
| Provide a summary of a 'dmbc_fit' class instance. | dmbc_fit-summary summary,dmbc_fit-method |
| Provide a summary of a 'dmbc_ic' class instance. | dmbc_ic-summary summary,dmbc_ic-method |
| Provide an update of a 'dmbc_ic' class instance. | dmbc_ic-update update,dmbc_ic-method |
