Package: dafishr 1.0.1

Fabio Favoretto

dafishr: Download, Wrangle, and Analyse Vessel Monitoring System Data

Allows to download, clean and analyse raw Vessel Monitoring System, VMS, data from Mexican government. You can use the vms_download() function to download raw data, or you can use the sample_dataset provided within the package. You can follow the tutorial in the vignette available at <https://cbmc-gcmp.github.io/dafishr/index.html>.

Authors:Fabio Favoretto [aut, cre], Eduardo Leon Solorzano [ctb]

dafishr_1.0.1.tar.gz
dafishr_1.0.1.tar.gz(r-4.5-noble)dafishr_1.0.1.tar.gz(r-4.4-noble)
dafishr_1.0.1.tgz(r-4.4-emscripten)dafishr_1.0.1.tgz(r-4.3-emscripten)
dafishr.pdf |dafishr.html✨
dafishr/json (API)
NEWS

# Install 'dafishr' in R:

install.packages('dafishr', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/cbmc-gcmp/dafishr/issues

Datasets:

all_mpas - Marine Protected Areas (MPAs) of Mexico
mpas_buffers - Buffer around remote Marine Protected Areas, MPAs, of Mexico
mx_coastline - Mexican coastline
mx_coastline_buffer - Buffer around the Mexican coastline
mx_eez - Mexico shape
mx_eez_pacific - Economic Exclusive Zone (EEZ) of the Pacific side of Mexico
mx_inland - Area inland of Mexico
mx_ports - Ports and Marinas of Mexico
mx_shape - Mexico mainland
pacific_landings - Catch data from the vessels in Mexico
pelagic_vessels_permits - List of vessels with pelagic fishing permits
remote_mpas - Remote Marine Protected Areas (MPAs) of Mexico
sample_dataset - Vessel Monitoring System, VMS, sample dataset from Mexican fishery commission

8 exports 0.09 score 101 dependencies 5 scripts 361 downloads

Last updated 2 months agofrom:20f0bb24c1. Checks:OK: 1 NOTE: 1. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Aug 22 2024
R-4.5-linux	NOTE	Aug 22 2024

Exports:%>%clean_land_points join_mpa_data join_ports_locations model_vms preprocessing_vms vms_clean vms_download

Dependencies:askpass base64enc bit bit64 bslib cachem cellranger class classInt cli clipr colorspace cpp11 crayon crosstalk curl data.table DBI digest dplyr e1071 evaluate fansi farver fastmap fontawesome fs fst fstcore generics ggplot2 glue gtable highr hms htmltools htmlwidgets httr isoband jquerylib jsonlite kernlab KernSmooth knitr labeling later lattice lazyeval lifecycle lubridate magrittr MASS Matrix memoise mgcv mime mixtools munsell nlme openssl pillar pkgconfig plotly prettyunits progress promises proxy purrr R6 rappdirs RColorBrewer Rcpp readr readxl rematch rlang rmarkdown s2 sass scales segmented sf stringi stringr survival sys tibble tidyr tidyselect timechange tinytex tzdb units utf8 vctrs viridisLite vroom withr wk xfun yaml

Where to start

Rendered fromdafisr.Rmdusingknitr::rmarkdownon Aug 22 2024.

Last update: 2022-12-06
Started: 2022-12-06

Citation

Readme and manuals

Help Manual

Help page	Topics
Marine Protected Areas (MPAs) of Mexico	all_mpas
Clean points falling inland	clean_land_points
Detect fishing vessel presence within Marine Protected Areas polygons in Mexico	join_mpa_data
Label points when vessel is at port	join_ports_locations
Vessel Modeling with Gaussian Mixture Models	model_vms
Buffer around remote Marine Protected Areas, MPAs, of Mexico	mpas_buffers
Mexican coastline	mx_coastline
Buffer around the Mexican coastline	mx_coastline_buffer
Mexico shape	mx_eez
Economic Exclusive Zone (EEZ) of the Pacific side of Mexico	mx_eez_pacific
Area inland of Mexico	mx_inland
Ports and Marinas of Mexico	mx_ports
Mexico mainland	mx_shape
Catch data from the vessels in Mexico	pacific_landings
List of vessels with pelagic fishing permits	pelagic_vessels_permits
Preprocessing Vessel Monitoring System data	preprocessing_vms
Remote Marine Protected Areas (MPAs) of Mexico	remote_mpas
Vessel Monitoring System, VMS, sample dataset from Mexican fishery commission	sample_dataset
Fixing dates and column names	vms_clean
Download Vessel Monitoring System, VMS, raw data	vms_download